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Orcid Publication

Detalle de: Lack of Self-Averaging in Neutral Evolution of Proteins

Title Lack of Self-Averaging in Neutral Evolution of Proteins
Abstract

We simulate neutral evolution of proteins imposing conservation of the thermodynamic stability of the native state in the framework of an effective model of folding thermodynamics. This procedure generates evolutionary trajectories in sequence space which share two universal features for all of the examined proteins. First, the number of neutral mutations fluctuates broadly from one sequence to another, leading to a non-Poissonian substitution process. Second, the number of neutral mutations displays strong correlations along the trajectory, thus causing the breakdown of self-averaging of the resulting evolutionary substitution process.

Apa Reference Bastolla, U., Porto, M., Roman, H. E., & Vendruscolo, M. (2002). Lack of Self-Averaging in Neutral Evolution of Proteins. Physical Review Letters, 89(20). 10.1103/physrevlett.89.208101
Doi 10.1103/physrevlett.89.208101
Publication Date 24 Oct 2002
Publication Type Article
Researcher Ugo Bastolla
Ontology Functional annotation, Function prediction, Structural bioinformatics, Molecular flexibility, Molecular evolution, Conservation Analysis, Evolutionary modelling, Ecological modelling, Sequence Alignment, Phylogenetic Analysis, Mutation Analysis and design, Network Biology, Structure-function relationship, Evolutionary rates, Microbial communities, Population dynamics
Research Groups Computational biology and Bioinformatics (CBM): from Proteins to Ecosystems
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