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Detalle de: The EpiDiverse Plant Epigenome-Wide Association Studies (EWAS) Pipeline

Title The EpiDiverse Plant Epigenome-Wide Association Studies (EWAS) Pipeline
Abstract

Bisulfite sequencing is a widely used technique for determining DNA methylation and its relationship with epigenetics, genetics, and environmental parameters. Various techniques were implemented for epigenome-wide association studies (EWAS) to reveal meaningful associations; however, there are only very few plant studies available to date. Here, we developed the EpiDiverse EWAS pipeline and tested it using two plant datasets, from P. abies (Norway spruce) and Q. lobata (valley oak). Hence, we present an EWAS implementation tested for non-model plant species and describe its use.

Apa Reference Can, S. N., Nunn, A., Galanti, D., Langenberger, D., Becker, C., Volmer, K., Heer, K., Opgenoorth, L., Fernandez-Pozo, N., & Rensing, S. A. (2021). The EpiDiverse Plant Epigenome-Wide Association Studies (EWAS) Pipeline. Epigenomes, 5(2), 12. 10.3390/epigenomes5020012
Doi 10.3390/epigenomes5020012
Publication Date 4 May 2021
Publication Type Article
Researcher Noé Fernández Pozo
Ontology DNA methylation
Research Groups Breeding and developmental biology of subtropical fruit
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