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Detalle de: Structural identifiability of systems biology models: A critical comparison of methods

Title Structural identifiability of systems biology models: A critical comparison of methods
Abstract

Analysing the properties of a biological system through in silico experimentation requires a satisfactory mathematical representation of the system including accurate values of the model parameters. Fortunately, modern experimental techniques allow obtaining time-series data of appropriate quality which may then be used to estimate unknown parameters. However, in many cases, a subset of those parameters may not be uniquely estimated, independently of the experimental data available or the numerical techniques used for estimation. This lack of identifiability is related to the structure of the model, i.e. the system dynamics plus the observation function. Despite the interest in knowing a priori whether there is any chance of uniquely estimating all model unknown parameters, the structural identifiability analysis for general non-linear dynamic models is still an open question. There is no method amenable to every model, thus at some point we have to face the selection of one of the possibilities. This work presents a critical comparison of the currently available techniques. To this end, we perform the structural identifiability analysis of a collection of biological models. The results reveal that the generating series approach, in combination with identifiability tableaus, offers the most advantageous compromise among range of applicability, computational complexity and information provided.

Apa Reference Chis, O.-T., Banga, J. R., & Balsa-Canto, E. (2011). Structural Identifiability of Systems Biology Models: A Critical Comparison of Methods. PLoS ONE, 6(11), e27755. 10.1371/journal.pone.0027755
Doi 10.1371/journal.pone.0027755
Publication Date 22 Nov 2011
Publication Type Article
Researcher Eva Balsa Canto
Ontology Systems Biology
Research Groups Computational Biology Lab at MBG
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