This site is under development. For the current active site, go to bcbhub.csic.es.

Orcid Publication

Detalle de: 3DBionotes COVID-19 edition

Title 3DBionotes COVID-19 edition
Abstract

Summary The web platform 3DBionotes-WS integrates multiple web services and an interactive web viewer to provide a unified environment in which biological annotations can be analyzed in their structural context. Since the COVID-19 outbreak, new structural data from many viral proteins have been provided at a very fast pace. This effort includes many cryogenic electron microscopy (cryo-EM) studies, together with more traditional ones (X-rays, NMR), using several modeling approaches and complemented with structural predictions. At the same time, a plethora of new genomics and interactomics information (including fragment screening and structure-based virtual screening efforts) have been made available from different servers. In this context, we have developed 3DBionotes-COVID-19 as an answer to: (i) the need to explore multiomics data in a unified context with a special focus on structural information and (ii) the drive to incorporate quality measurements, especially in the form of advanced validation metrics for cryo-EM. Availability and implementation https://3dbionotes.cnb.csic.es/ws/covid19. Supplementary information Supplementary data are available at Bioinformatics online.

Apa Reference Macias, J.R., Sanchez-Garcia, R., Conesa, P., Ramirez-Aportela, E., Martinez Gonzalez, M., Wert-Carvajal, C., Parra-Perez, A.M., Segura Mora, J., Horrell, S., Thorn, A., Sorzano, C.O.S. & Carazo, J.M. (2021). 3DBionotes COVID-19 edition. Bioinformatics, 37(22), 4258-4260. 10.1093/bioinformatics/btab397
Doi 10.1093/bioinformatics/btab397
Publication Date 20 May 2021
Publication Type Software
Researcher Jose María Salvador Carazo Garcia
Ontology Omics, Genomics, Structural bioinformatics, Experimental structure determination, Web-service, Drug Discovery and design, Molecular Interactions/Docking, Protein-Protein Interactions, Cryo-electron microscopy, Virtual screening
Research Groups
Tools COVID-19 Structural Hub

Suggest changes

Publications are synced automatically from ORCID, so they can't be edited here directly. Spotted something wrong? Let us know below and we'll take care of it.

← Return to Home