Detalle de: 3DBionotes COVID-19 edition
| Title | 3DBionotes COVID-19 edition |
| Abstract |
Summary The web platform 3DBionotes-WS integrates multiple web services and an interactive web viewer to provide a unified environment in which biological annotations can be analyzed in their structural context. Since the COVID-19 outbreak, new structural data from many viral proteins have been provided at a very fast pace. This effort includes many cryogenic electron microscopy (cryo-EM) studies, together with more traditional ones (X-rays, NMR), using several modeling approaches and complemented with structural predictions. At the same time, a plethora of new genomics and interactomics information (including fragment screening and structure-based virtual screening efforts) have been made available from different servers. In this context, we have developed 3DBionotes-COVID-19 as an answer to: (i) the need to explore multiomics data in a unified context with a special focus on structural information and (ii) the drive to incorporate quality measurements, especially in the form of advanced validation metrics for cryo-EM. Availability and implementation https://3dbionotes.cnb.csic.es/ws/covid19. Supplementary information Supplementary data are available at Bioinformatics online. |
| Apa Reference | Macias, J.R., Sanchez-Garcia, R., Conesa, P., Ramirez-Aportela, E., Martinez Gonzalez, M., Wert-Carvajal, C., Parra-Perez, A.M., Segura Mora, J., Horrell, S., Thorn, A., Sorzano, C.O.S. & Carazo, J.M. (2021). 3DBionotes COVID-19 edition. Bioinformatics, 37(22), 4258-4260. 10.1093/bioinformatics/btab397 |
| Doi | 10.1093/bioinformatics/btab397 |
| Publication Date | 20 May 2021 |
| Publication Type | Software |
| Researcher | Jose María Salvador Carazo Garcia |
| Ontology | Omics, Genomics, Structural bioinformatics, Experimental structure determination, Web-service, Drug Discovery and design, Molecular Interactions/Docking, Protein-Protein Interactions, Cryo-electron microscopy, Virtual screening |
| Research Groups | |
| Tools | COVID-19 Structural Hub |
