Detalle de: Volumetric restrictions in single particle 3DEM reconstruction
| Title | Volumetric restrictions in single particle 3DEM reconstruction |
| Abstract |
3D electron microsscopy aims at the reconstruction of density volumes corresponding to the electrostatic potential distribution of macro-molecules. There are many factors limiting the resolution achievable when this technique is applied to biological macromolecules: microscope imperfections, molecule flexibility, lack of projections from certain directions, unknown angular distribution, noise, etc. In this communication we explore the quality gain in the reconstruction by including a priori knowledge such as particle symmetry, occupied volume, known surface relief, density nonnegativity and similarity to a known volume in order to improve the quality of the reconstruction. If the reconstruction is represented as a series expansion, such constraints can be expressed by set of equations that the expansion coefficients must satisfy. In this work, these equation sets are specified and combined in a novel way with the ART + blobs reconstruction algorithm. The effect of each one on the reconstruction of a realistic phantom is explored. Finally, the application of these restrictions to 3D reconstructions from experimental data are studied. |
| Apa Reference | Sorzano, C., Velázquez-Muriel, J., Marabini, R., Herman, G. & Carazo, J. (2008). Volumetric restrictions in single particle 3DEM reconstruction. Pattern Recognition, 41(2), 616-626. 10.1016/j.patcog.2007.06.010 |
| Doi | 10.1016/j.patcog.2007.06.010 |
| Publication Date | Feb 2008 |
| Publication Type | Article |
| Researcher | Jose María Salvador Carazo Garcia |
| Ontology | Experimental structure determination, Molecular flexibility |
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