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Orcid Publication

Detalle de: Volumetric restrictions in single particle 3DEM reconstruction

Title Volumetric restrictions in single particle 3DEM reconstruction
Abstract

3D electron microsscopy aims at the reconstruction of density volumes corresponding to the electrostatic potential distribution of macro-molecules. There are many factors limiting the resolution achievable when this technique is applied to biological macromolecules: microscope imperfections, molecule flexibility, lack of projections from certain directions, unknown angular distribution, noise, etc. In this communication we explore the quality gain in the reconstruction by including a priori knowledge such as particle symmetry, occupied volume, known surface relief, density nonnegativity and similarity to a known volume in order to improve the quality of the reconstruction. If the reconstruction is represented as a series expansion, such constraints can be expressed by set of equations that the expansion coefficients must satisfy. In this work, these equation sets are specified and combined in a novel way with the ART + blobs reconstruction algorithm. The effect of each one on the reconstruction of a realistic phantom is explored. Finally, the application of these restrictions to 3D reconstructions from experimental data are studied.

Apa Reference Sorzano, C., Velázquez-Muriel, J., Marabini, R., Herman, G. & Carazo, J. (2008). Volumetric restrictions in single particle 3DEM reconstruction. Pattern Recognition, 41(2), 616-626. 10.1016/j.patcog.2007.06.010
Doi 10.1016/j.patcog.2007.06.010
Publication Date Feb 2008
Publication Type Article
Researcher Jose María Salvador Carazo Garcia
Ontology Experimental structure determination, Molecular flexibility
Research Groups
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