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Detalle de: An integrated approach for genome annotation of the eukaryotic thermophile Chaetomium thermophilum

Title An integrated approach for genome annotation of the eukaryotic thermophile Chaetomium thermophilum
Abstract

The thermophilic fungus Chaetomium thermophilum holds great promise for structural biology. To increase the efficiency of its biochemical and structural characterization and to explore its thermophilic properties beyond those of individual proteins, we obtained transcriptomics and proteomics data, and integrated them with computational annotation methods and a multitude of biochemical experiments conducted by the structural biology community. We considerably improved the genome annotation of Chaetomium thermophilum and characterized the transcripts and expression of thousands of genes. We furthermore show that the composition and structure of the expressed proteome of Chaetomium thermophilum is similar to its mesophilic relatives. Data were deposited in a publicly available repository and provide a rich source to the structural biology community.

Apa Reference Bock, T., Chen, W., Ori, A., Malik, N., Silva-Martin, N., Huerta-Cepas, J., Powell, S.T., Kastritis, P.L., Smyshlyaev, G., Vonkova, I., Kirkpatrick, J., Doerks, T., Nesme, L., Baßler, J., Kos, M., Hurt, E., Carlomagno, T., Gavin, A., Barabas, O., Müller, C.W., van Noort, V., Beck, M. & Bork, P. (2014). An integrated approach for genome annotation of the eukaryotic thermophile Chaetomium thermophilum. Nucleic Acids Research, 42(22), 13525-13533. 10.1093/nar/gku1147
Doi 10.1093/nar/gku1147
Publication Date 14 Nov 2014
Publication Type Article
Researcher Jaime Huerta Cepas
Ontology Transcriptomics, Genomic Annotation, Proteomics
Research Groups
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