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Detalle de: PanRNA: v2.1.11

Title PanRNA: v2.1.11
Abstract

PanRNA is a python written pipeline to map and count reads of an RNA-seq experiment. We divide the pipeline in two parts. The first one, we call Basic Run, is the the most common task on RNA-seq which only map the reads to a reference genome and return counts files for each sample. These can be used for differential expression analysis. The second part, the full PanRNA run, includes an extra task meant to avoid loosing information due to a lack of features in the reference genome used.

Apa Reference Morard, Miguel, Alonso-del-Real, Javier (2024). PanRNA: v2.1.11 [Software]. Zenodo. 10.5281/ZENODO.12626836
Doi 10.5281/ZENODO.12626836
Publication Date 2 Jul 2024
Publication Type Software
Researcher Javier Alonso del Real
Ontology Transcriptomics, RNA Sequencing (RNA-seq), Expression Profiling
Research Groups
Tools

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