Research Group

Detalle de: Biodiversity and Ecosystem Functioning Laboratory (BioFunLab)

Title	Biodiversity and Ecosystem Functioning Laboratory (BioFunLab)
Description	The BioFunLab, led by Manuel Delgado Baquerizo, aims to advance our knowledge on biodiversity and the functioning of natural, agricultural and urban ecosystems in a changing world at global and regional scales.
Home Page	https://www.irnas.csic.es/en/research/departments/agrobiotechnology-plant-chemistry-and-biodiversity/biofunlab/
Contact Email	m.delgado.baquerizo@csic.es
Collaborating Companies
Spin Off
Patents
Hpc Resources	in house
Institution	IRNAS
Ontology	Omics, Computational Methods, Transcriptomics, RNA Sequencing (RNA-seq), Genomics, Genome Sequencing, Genome Assembly, Genomic Annotation, Molecular evolution, Population genomics, Sequence analysis, Sequence Alignment, Phylogenetic Analysis, Proteomics, Mapping, Metabolomics, Microbial communities, Metagenomics, Amplicon Sequencing, Metatranscriptomics
Tools
Service Units
Research Lines	Structure and functioning of environmental microbiomes, Global change effects on biodiversity and ecosystem functioning, Global atlases and patterns of biodiversity, Valorisation of lignocellulosic crops
Funded Projects
Selected Publications	TtsI: Beyond Type III Secretion System Activation in Rhizobia Article · 5 Jan 2025 Genetic and species rearrangements in microbial consortia impact biodegradation potential Article · Jan 2025 Sinorhizobium fredii HH103 flgJ is a flagellar gene induced by genistein in a NodD1- and TtsI- dependent manner Article · 31 May 2024 Methods for Studying Swimming and Surface Motilities in Rhizobia Book / chapter · 2024 A complex regulatory network governs the expression of symbiotic genes in Sinorhizobium fredii HH103 Article · 21 Dec 2023 View all (12 more) Surface Motility Regulation of Sinorhizobium fredii HH103 by Plant Flavonoids and the NodD1, TtsI, NolR, and MucR1 Symbiotic Bacterial Regulators Article · 12 Jul 2022 The nodD1 gene of Sinorhizobium fredii HH103 Restores Nodulation Capacity on Bean in a Rhizobium tropici CIAT 899 nodD1/nodD2 Mutant, but the Secondary Symbiotic Regulators nolR, nodD2 or syrM Prevent HH103 to Nodulate with This Legume Article · 10 Jan 2022 Sinorhizobium fredii HH103 syrM inactivation affects the expression of a large number of genes, impairs nodulation with soybean and extends the host-range to Lotus japonicus Article · 5 Jan 2020 Sinorhizobium fredii HH103 nolR and nodD2 mutants gain capacity for infection thread invasion of Lotus japonicus Gifu and Lotus burttii Article · 20 Mar 2019 Sinorhizobium fredii HH103 RirA Is Required for Oxidative Stress Resistance and Efficient Symbiosis with Soybean Article · 12 Feb 2019 Sinorhizobium fredii Strains HH103 and NGR234 Form Nitrogen Fixing Nodules With Diverse Wild Soybeans (Glycine soja) From Central China but Are Ineffective on Northern China Accessions Article · 21 Nov 2018 Transcriptomic studies of the effect of nod gene-inducing molecules in rhizobia: Different weapons, one purpose Article · 21 Dec 2017 The Sinorhizobium (Ensifer) fredii HH103 rkp-2 region is involved in the biosynthesis of lipopolysaccharide and exopolysaccharide but not in K-antigen polysaccharide production Article · 9 May 2017 The underlying process of early ecological and genetic differentiation in a facultative mutualistic Sinorhizobium meliloti population Article · 6 Apr 2017 TheSinorhizobium frediiHH103 MucR1 Global Regulator Is Connected With thenodRegulon and Is Required for Efficient Symbiosis WithLotus burttiiandGlycine maxcv. Williams Article · Sep 2016 A transcriptomic analysis of the effect of genistein on Sinorhizobium fredii HH103 reveals novel rhizobial genes putatively involved in symbiosis Article · 19 Aug 2016 Exopolysaccharide Production by Sinorhizobium fredii HH103 Is Repressed by Genistein in a NodD1-Dependent Manner Article · 3 Aug 2016
Researchers	Pilar Navarro Gómez

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