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Research Group

Detalle de: Subcellular architecture

Title Subcellular architecture
Description

Our research interest is mainly focused on the study of the subcellular architecture and exploration of the structural alterations under pathological conditions in neurodegenerative diseases, with particular focus on Huntington's Disease. Our working hypothesis is that the maintance of the subcellular architecture is of paramount importance for the cellular homeostasis and that the analysis of such alterations may contribute to gain insights into the pathophysiological basis of diseases, to serve as a biomarker of disease progression and effects of therapeutic treatments and also to enable the identification of new therapeutic targets.

In our work we develop and apply advanced preparation protocols based on cryo-fixation that ensure optimal structural preservation of samples from post-mortem brain tissue and peripheral tissues (muscle, blood), taken from animal models and patients. And we then use state-of-the-art 3D imaging and nanotomography technologies, namely (cryo-) electron tomography and (cryo-)FIB/SEM (focused ion beam scanning electron microscopy), and develop and apply advanced image processing methods to conduct the structural analysis.

Home Page https://tiny.cc/neuroarch
Contact Email JJ.Fernandez@csic.es
Collaborating Companies
Spin Off
Patents
Hpc Resources
Institution CINN
Ontology Computational Methods, Resources, Data Analysis, Artificial Intelligence, Machine Learning in Biology, Data Visualization, Applications of Computational Biology, Model organisms, Computational Techniques, High-performance Computing, Parallel Computing, Image analysis, Deep Learning in Biology, Clinical data
Tools Tomo3DEM
Service Units Electron Microscopy Facility at CINN
Research Lines Analysis of subcellular architecture with nanotomography and image processing, Analysis of microtubule-organizing centers with cryo-ET, Advanced 2D/3D image processing and analysis, High performance computing
Funded Projects Synthetic biology-based tools for Correlative Light-Electron Microscopy (SynCLEM), Towards computer-aided analysis of subcellular architecture as a tool for disease diagnosis (ComArc)
Selected Publications
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Researchers Jose-Jesus Fernandez

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