Salvador Capella
INB Coordination Node · BSC
Biography
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Salvador Capella-Gutierrez leads the Spanish National Bioinformatics (INB) Coordination Node at the Barcelona Supercomputing Center (BSC). His current focus is on the development of long-term infrastructures to facilitate the scientific benchmarking and technical monitoring of bioinformatics tools, web services and workflows in the context of ELIXIR, a pan-European distributed organization across 21 countries and more than 180 institutions. His team is also responsible for the technical coordination of ELIXIR in Spain, which implies their involvement in several bioinformatics projects. These include contributions to the RD-Connect and the BluePrint data portal development from a technical and scientific perspective. Dr. Capella-Gutierrez joined the BSC in July 2017 coming from the Spanish National Cancer Research Center (CNIO) where he held a similar role. He received his PhD in Bioinformatics in 2012, awarded by the Center for Genomic Regulation (CRG) together with the Pompeu Fabra University (Barcelona, Spain). His work focused on applying evolutionary methods to different omics data to answer long-standing biological questions. From the beginning of his scientific career, Dr. Capella-Gutierrez has participated in different international consortia, which is reflected as part of his scientific publications covering an ample number of topics. His postdoctoral training was carried out in the context of an international project led by the KNAW-CBS Fungal Biodiversity Centre (Utrecht, The Netherlands) focusing on the development of a computational framework to obtain unique biomarkers to identify human pathogenic fungi species. Identified unique biomarkers were experimentally validated using clinical samples. As part of the validation, Dr. Capella-Gutierrez optimized a protocol for fungal DNA extraction from blood samples getting a sensitivity of one CFU per ml of blood from an input sample of just three ml. Salvador Capella-Gutierrez complemented his scientific and technological background by attending a number of courses on business management and administration, including the executive programme “ Accelerate: Building Business from Science and Technology ” by the IE Business School in order to improve his managerial skills and to gain a better understanding of how to professionally and efficiently work with other professionals outside the scientific world. |
Profile
| Institution | BSC |
| Position | Investigador BSC |
| Home page | https://www.bsc.es/capella-gutierrez-salvador |
| Contact email | salvador.capella@bsc.es |
| ORCID | 0000-0002-0309-604X |
BCB Hub
| BCB Committee | Not a member |
| BCB Tools | |
| BCB Services |
Research
Research topics
Research lines
Projects, networks, transfer & teaching
Funded projects 20
- ELIXIR-EXCELERATE: Fast-track ELIXIR implementation and drive early user exploitation across the life-sciences.
- Enhacing TRANslational SAFEty Assessment through Integrative Knowledge Management
- Providing an open collaborative space for digital biology in Europe
- FAIRplus
View all (16 more)
- European Joint Programme on Rare Diseases
- individualizedPaediatricCure: Cloud-based virtual-patient models for precision paediatric oncology
- An EU-Canada joint infrastructure for next-generation multi-Study Heart research
- European Open Science Cloud - Expanding Capacities by building Capabilities
- A European Cancer Image Platform Linked to Biological and Health Data for Next-Generation Artificial Intelligence and Precision Medicine in Oncology
- Improved clinical decisions via integrating multiple data levels to overcome chemotherapy resistance in high-grade serous ovarian cancer
- HealthyCloud – Health Research & Innovation Cloud
- leveraging the European compute infrastructures for data-intensive research guided by FAIR principles
- Molecular Dynamics Data Bank. The European Repository for Biosimulation Data
- BioExcel Centre of Excellence for Computational Biomolecular Research
- European Virtual Institute for Research Software Excellence
- BLUEPRINT: A BLUEPRINT of haematopoietic epigenomes
- RD-CONNECT: An integrated platform connecting registries, biobanks and clinical bioinformatics for rare disease research
- EUCAIM: European Federation for Cancer Images
- INB-2017 - AValencia: Plataforma de Recursos Biomoleculares y Bioinformáticos
- INB-2018-2020: Instituto Nacional de Bioinformática 2018-2020
Publications 50 entries
- IMPaCT-Data: A Federated Precision Medicine Infrastructure Associated with Science and Technology in Spain Book / chapter · 21 May 2026
- Open and sustainable AI: challenges, opportunities and the road ahead in the life sciences Article · 20 Mar 2026
- Credit, recognition, and reward for non-traditional research artefacts in the Life Sciences Preprint · 10 Mar 2026
- Federated learning frameworks: quality and interoperability for biomedical research Article · 6 Jan 2026
- The Federated European Genome–Phenome Archive as a global network for sharing human genomics data Article · Mar 2025
View all (45 more)
- FAIRsoft—a practical implementation of FAIR principles for research software Article · 22 Jul 2024
- WOMBAT-P: Benchmarking Label-Free Proteomics Data Analysis Workflows Preprint · 3 Oct 2023
- DEBBIE: The Open Access Database of Experimental Scaffolds and Biomaterials Built Using an Automated Text Mining Pipeline Article · 10 Aug 2023
- The FAIR Cookbook - the essential resource for and by FAIR doers Article · 19 May 2023
- The landscape of expression and alternative splicing variation across human traits Article · Jan 2023
- Community-driven ELIXIR activities in single-cell omics Article · 29 Jul 2022
- A roadmap for the generation of benchmarking resources for antimicrobial resistance detection using next generation sequencing Article · 16 Mar 2022
- COVID-19 Flow-Maps an open geographic information system on COVID-19 and human mobility for Spain Article · 30 Nov 2021
- PhylomeDB V5: an expanding repository for genome-wide catalogues of annotated gene phylogenies Article · 30 Oct 2021
- Perspectives on automated composition of workflows in the life sciences Article · 7 Sep 2021
- Recommendations for the FAIRification of genomic track metadata Article · 1 Apr 2021
- The eTRANSAFE Project on Translational Safety Assessment through Integrative Knowledge Management: Achievements and Perspectives Article · 8 Mar 2021
- A catalogue of 863 Rett-syndrome-causing MECP2 mutations and lessons learned from data integration Article · 15 Jan 2021
- The ELIXIR Human Copy Number Variations Community: building bioinformatics infrastructure for research Article · 13 Oct 2020
- 863 different causes of Rett syndrome and lessons learned from data integration. Preprint · 16 Apr 2020
- An intrinsically disordered proteins community for ELIXIR Article · 15 Oct 2019
- The bio.tools registry of software tools and data resources for the life sciences Article · 12 Aug 2019
- SmartRNASeqCaller: improving germline variant calling from RNAseq Preprint · 27 Jun 2019
- Ten steps to get started in Genome Assembly and Annotation Article · 5 Feb 2018
- Lessons Learned: Recommendations for Establishing Critical Periodic Scientific Benchmarking Preprint · 31 Aug 2017
- Gearing up to handle the mosaic nature of life in the quest for orthologs Article · 30 Aug 2017
- Four simple recommendations to encourage best practices in research software Article · 13 Jun 2017
- LimTox: a web tool for applied text mining of adverse event and toxicity associations of compounds, drugs and genes Article · 22 May 2017
- Genomic history of the origin and domestication of common bean unveils its closest sister species Article · 29 Mar 2017
- Extreme genomic erosion after recurrent demographic bottlenecks in the highly endangered Iberian lynx Article · Dec 2016
- High-Throughput Proteomics Reveals the Unicellular Roots of Animal Phosphosignaling and Cell Differentiation Article · Oct 2016
- Standardized benchmarking in the quest for orthologs Article · 4 Apr 2016
- Genome and transcriptome analysis of the Mesoamerican common bean and the role of gene duplications in establishing tissue and temporal specialization of genes Article · 25 Feb 2016
- Evolution of selenophosphate synthetases: emergence and relocation of function through independent duplications and recurrent subfunctionalization Article · 20 Jul 2015
- The Solanum commersonii Genome Sequence Provides Insights into Adaptation to Stress Conditions and Genome Evolution of Wild Potato Relatives Article · Apr 2015
- Whole-genome analyses resolve early branches in the tree of life of modern birds Article · 12 Dec 2014
- Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs Article · 12 Dec 2014
- The First Myriapod Genome Sequence Reveals Conservative Arthropod Gene Content and Genome Organisation in the Centipede Strigamia maritima Article · 25 Nov 2014
- From community approaches to single-cell genomics: the discovery of ubiquitous hyperhalophilic Bacteroidetes generalists Article · 13 Jun 2014
- A phylogenomics approach for selecting robust sets of phylogenetic markers Article · 28 Jan 2014
- Transcriptomic analysis of a psammophyte food crop, sand rice (Agriophyllum squarrosum) and identification of candidate genes essential for sand dune adaptation Article · 2014
- The genome of the recently domesticated crop plant sugar beet (Beta vulgaris) Article · 18 Dec 2013
- PhylomeDB v4: zooming into the plurality of evolutionary histories of a genome Article · 25 Nov 2013
- Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida Article · 15 Mar 2013
- Measuring guide-tree dependency of inferred gaps in progressive aligners Article · 23 Feb 2013
- Phylogenomics supports microsporidia as the earliest diverging clade of sequenced fungi Article · 31 May 2012
- Phylemon 2.0: a suite of web-tools for molecular evolution, phylogenetics, phylogenomics and hypotheses testing Article · 6 Jun 2011
- PhylomeDB v3.0: an expanding repository of genome-wide collections of trees, alignments and phylogeny-based orthology and paralogy predictions Article · 12 Nov 2010
- Lack of phylogenetic support for a supposed actinobacterial origin of peroxisomes Article · Oct 2010
- trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses Article · 8 Jun 2009
