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Researcher

Fabian Jetzinger

Genomics of Gene Expression · I2SYSBIO

Biography

I am an industrial PhD student at BioBam Bioinformatics S.L. in Valencia and cooperate heavily with the Genomics of Gene Expression Lab at I2SysBio.
My research interests are mainly in the bioinformatic analysis of long-read RNA sequencing data, particularly making such analyses more user-friendly and therefore accessible to researchers without extensive computational skills. My current work focuses on the evaluation of transcriptome reconstruction tools for lrRNA-seq data, but we also plan to make use of my background in Data Science to explore the landscape of deep learning-based methods for functional annotation of RNA and protein sequences.

Profile

Institution I2SYSBIO
Position PhD student
Home page https://www.linkedin.com/in/fabian-jetzinger/
Contact email fjetzinger@biobam.com
ORCID 0009-0000-3150-2167

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Research

Research topics

OmicsComputational MethodsResourcesTranscriptomicsRNA Sequencing (RNA-seq)Data AnalysisArtificial IntelligenceMachine Learning in BiologyBioinformatics Software and ToolsAnnotation toolsAnalysis packages (R, Python, etc.)Applications of Computational Biology
View all (17 more)
Model organismsBioinformatics enabling techniquesStandards in Computational BiologyBenchmarkingGenomicsLarge language modelsFunctional genomicsFunctional annotationFunction predictionComputational TechniquesDesktop applicationGenomic AnnotationFAIRficationBioinformatics educationPathway analysisDeep Learning in BiologyCloud Computing

Research lines

Projects, networks, transfer & teaching

Industry & knowledge transfer

Collaborating companies

  • BioBam Bioinformatics S.L.

Publications 1 entry

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