BARLEYMAP
Tool to search the position of barley genetic markers on the Barley Physical Map and the POPSEQ map
Basic Information
| Repository | https://barleymap.eead.csic.es/barleymap/ |
| Documentation | https://barleymap.eead.csic.es/barleymap/help/ |
| Main publication (DOI) | 10.1007/s11032-015-0253-1 view |
| Contact email | compbio@eead.csic.es |
| Authors/Maintainers | Bruno Contreras Moreira |
| Type of application | Web-service, R/python package |
| Programming languages | PythonJavaScriptPerl |
| Keywords | Omics, Computational Methods, Resources, Data Analysis, Bioinformatics Software and Tools, Annotation tools, Analysis packages (R, Python, etc.), Data Visualization, Applications of Computational Biology, Bioinformatics enabling techniques, Genomics, Functional genomics, Functional annotation, Function prediction, Bioinformatics Infrastructure, Biological Databases, Desktop application, Genomic Annotation, Variant calling, Statistical Methods for Biology, Web-service, Molecular evolution, Conservation Analysis, Data Repositories, FAIRfication, Population genomics, Sequence analysis, Sequence Alignment, Experimental design, Mapping, Pathway analysis, Food safety, Biological Ontologies |
Technical details
| Input file formats | fasta, Other |
| Output file formats | tsv, Other |
| Software compatibility | Linux, Mac, Windows |
| Hardware requirements | Debian 12 virtual machine 32GB disk, 20GB RAM, 4 CPU |
| Type of containerization | None |
| Wrapper type | None |
| Compatible tools | Graingenes |
| Funding resource | National competitive funding, No funding |
| Funding support | National competitive funding, Regional/local competitive funding, Institutional funding, EU funding, No funding |
Statistics
| Unique users (last 12 months) | 100-1000 |
| Unique users (since first release) | |
| Software downloads (last 12 months) | |
| Software downloads (since first release) | |
| Jobs submitted (last 12 months) | >10000 |
| Jobs submitted (since first release) | |
| Repository clones (last 12 months) | |
| Repository clones (since first release) | |
| Citations (last 12 months) | 100-1000 |
| Citations (since first release) | 100-1000 (104 as of 15/10/2026) |
| Early-stage researcher effort (development) | |
| Early-stage researcher effort (maintenance) | |
| Technician-supported effort (development) | |
| Technician-supported effort (maintenance) | |
| Other effort (development) | |
| Other effort (maintenance) | |
| Total effort (development) | |
| Total effort (maintenance) |