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Tool

Pomelo2

Statistical analysis of differential expression, including linear models and permutation tests

Basic Information

Repository http://pomelo2.iib.uam.es/
Documentation http://pomelo2.iib.uam.es/help/pomelo2-help.html
Main publication (DOI) 10.1093/nar/gkp366 view
Contact email ramon.diaz@iib.uam.es
Authors/Maintainers Ramon Díaz Uriarte
Type of application Web-service
Programming languages PythonRJavaScript
Keywords Omics, Resources, Transcriptomics, Data Analysis, Bioinformatics Software and Tools, Expression Profiling, Computational Techniques, High-performance Computing, Parallel Computing, Statistical Methods for Biology, Frequentist analysis, Web-service, Bayesian statistics, Non-parametric statistics

Technical details

Input file formats csv, Other
Output file formats csv, Other
Software compatibility Linux, Mac, Windows
Hardware requirements
Type of containerization None
Wrapper type None
Compatible tools
Funding resource National competitive funding
Funding support National competitive funding, No funding
Statistics
Unique users (last 12 months)
Unique users (since first release)
Software downloads (last 12 months)
Software downloads (since first release)
Jobs submitted (last 12 months)
Jobs submitted (since first release)
Repository clones (last 12 months)
Repository clones (since first release)
Citations (last 12 months) <100 (~1 as of 15/10/2026)
Citations (since first release) <100 (49 as of 15/10/2026)
Early-stage researcher effort (development)
Early-stage researcher effort (maintenance)
Technician-supported effort (development)
Technician-supported effort (maintenance)
Other effort (development)
Other effort (maintenance)
Total effort (development)
Total effort (maintenance)

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