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Tool

pyDockDNA

Protein-DNA docking.

Basic Information

Repository https://model3dbio.csic.es/pydockdna
Documentation https://model3dbio.csic.es/pydockdna
Main publication (DOI) 10.3389/fmolb.2022.988996 view
Contact email juan.fernandezrecio@icvv.es
Authors/Maintainers Luis Ángel Rodríguez Lumbreras, Juan Fernández Recio
Type of application Web-service
Programming languages Python
Keywords Computational Methods, Structural bioinformatics, Computational models and simulations, Biomolecular simulation, Structure prediction, Molecular Interactions/Docking

Technical details

Input file formats pdb
Output file formats pdf
Software compatibility Linux
Hardware requirements
Type of containerization None
Wrapper type None
Compatible tools pyDock
Funding resource National competitive funding
Funding support No funding
Statistics
Unique users (last 12 months)
Unique users (since first release)
Software downloads (last 12 months)
Software downloads (since first release)
Jobs submitted (last 12 months)
Jobs submitted (since first release)
Repository clones (last 12 months)
Repository clones (since first release)
Citations (last 12 months) <100 (~12 as of 15/10/2026)
Citations (since first release) <100 (43 as of 15/10/2026)
Early-stage researcher effort (development)
Early-stage researcher effort (maintenance)
Technician-supported effort (development)
Technician-supported effort (maintenance)
Other effort (development)
Other effort (maintenance)
Total effort (development)
Total effort (maintenance)

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