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Tool

GenSSI 2.0

GenSSI 2.0 (Generating Series for testing Structural Identifiability) is a toolbox for structural identifiability analysis of linear and nonlinear ODE models. It couples the generating series approach with identifiability tableaus, and supports SBML import, multi-experiment analysis and state/parameter transformations.

Basic Information

Repository https://github.com/genssi-developer/GenSSI
Documentation https://github.com/genssi-developer/GenSSI/blob/HEAD/GenSSI-refman.pdf
Seminar Eva Balsa (IIM-CSIC) presents the tools AMIGO2 & GenSSI2
Main publication (DOI) 10.1093/bioinformatics/btx735 view
Contact email tom@thomassligon.info
Authors/Maintainers Eva Balsa Canto, Julio Rodriguez Banga
Type of application Desktop application
Programming languages MATLABC
Keywords Biosystems Modeling, Systems Biology, Dynamical systems

Technical details

Input file formats
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Type of containerization
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Compatible tools
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Funding support
Statistics
Unique users (last 12 months)
Unique users (since first release)
Software downloads (last 12 months)
Software downloads (since first release)
Jobs submitted (last 12 months)
Jobs submitted (since first release)
Repository clones (last 12 months)
Repository clones (since first release)
Citations (last 12 months) <100 (~9 as of 15/10/2026)
Citations (since first release) 100-1000 (139 as of 15/10/2026)
Early-stage researcher effort (development)
Early-stage researcher effort (maintenance)
Technician-supported effort (development)
Technician-supported effort (maintenance)
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Total effort (maintenance)

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