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Tool

VisId

MATLAB toolbox for the visualisation of identifiability problems in dynamic biochemical models. It generates network files describing the relationships among non-identifiable parameters, and between parameters and model variables, for visualisation in Cytoscape. It relies on AMIGO2 and MEIGO.

Basic Information

Repository https://github.com/gabora/visid
Documentation https://github.com/gabora/visid/blob/HEAD/readme.md
Main publication (DOI) 10.1186/s12918-017-0428-y view
Contact email gabor.attila87@gmail.com
Authors/Maintainers Julio Rodriguez Banga
Type of application Desktop application
Programming languages MATLAB
Keywords Data Visualization, Biosystems Modeling, Dynamical systems

Technical details

Input file formats
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Statistics
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Software downloads (since first release)
Jobs submitted (last 12 months)
Jobs submitted (since first release)
Repository clones (last 12 months)
Repository clones (since first release)
Citations (last 12 months) <100 (~14 as of 15/10/2026)
Citations (since first release) 100-1000 (131 as of 15/10/2026)
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Technician-supported effort (development)
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