Detalle de: Systems biology at the giga-scale: Large multiscale models of complex, heterogeneous multicellular systems
| Title | Systems biology at the giga-scale: Large multiscale models of complex, heterogeneous multicellular systems |
| Abstract |
Agent-based modelling has proven its usefulness in several biomedical projects by explaining and uncovering mechanisms in diseases. Nevertheless, the scenarios addressed in these models usually consider a small number of cells, lack cell-specific characterisation and dynamic interactions and have a simplistic environment description. Tools that enable scalable, real-sized simulations of biological systems that require complex setups are needed to have simulations closer to biomedical scenarios that can capture cell-to-cell heterogeneity and system-wide emerging properties. To deliver simulations at the giga-scale (109 cells), different tools have implemented technologies to run in high-performance computing clusters. We hereby review these efforts and detail the main areas of improvement the field needs to focus on to have simulations that are a step closer to having digital twins. |
| Apa Reference | Montagud, A., Ponce-de-Leon, M., & Valencia, A. (2021). Systems biology at the giga-scale: Large multiscale models of complex, heterogeneous multicellular systems. Current Opinion in Systems Biology, 28, 100385. 10.1016/j.coisb.2021.100385 |
| Doi | 10.1016/j.coisb.2021.100385 |
| Publication Date | Dec 2021 |
| Publication Type | Article |
| Researcher | Arnau Montagud Aquino |
| Ontology | Systems Biology |
| Research Groups | Systems Biology Modeling |
| Tools |
