Detalle de: Stochastic stabilization of phenotypic States: the genetic bistable switch as a case study.
| Title | Stochastic stabilization of phenotypic States: the genetic bistable switch as a case study. |
| Abstract |
We study by means of analytical calculation and stochastic simulations how intrinsic noise modifies the bifurcation diagram of gene regulatory processes that can be effectively described by the Langevin formalism. In a general context, our study raises the intriguing question of how biochemical fluctuations redesign the epigenetic landscape in differentiation processes. We have applied our findings to a general class of regulatory processes that includes the simplest case that displays a bistable behavior and hence phenotypic variability: the genetic auto-activating switch. Thus, we explain why and how the noise promotes the stability of the low-state phenotype of the switch and show that the bistable region is extended when increasing the intensity of the fluctuations. This phenomenology is found in a simple one-dimensional model of the genetic switch as well as in a more detailed model that takes into account the binding of the protein to the promoter region. Altogether, we prescribe the analytical means to understand and quantify the noise-induced modifications of the bifurcation points for a general class of regulatory processes where the genetic bistable switch is included. |
| Apa Reference | Weber, M., & Buceta, J. (2013). Stochastic Stabilization of Phenotypic States: The Genetic Bistable Switch as a Case Study. PLoS ONE, 8(9), e73487. 10.1371/journal.pone.0073487 |
| Doi | 10.1371/journal.pone.0073487 |
| Publication Date | 11 Sep 2013 |
| Publication Type | Article |
| Researcher | Javier Buceta |
| Ontology | Computational models and simulations, Epigenomics, Regulatory biology |
| Research Groups | TheSiMBioSys (Theoretical and In Silico Modeling of Biological Systems) |
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