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Detalle de: Propidium monoazide integrated with qPCR enables the detection and enumeration of infectious enteric RNA and DNA viruses in clam and fermented sausages

Title Propidium monoazide integrated with qPCR enables the detection and enumeration of infectious enteric RNA and DNA viruses in clam and fermented sausages
Abstract

The increase of foodborne viral outbreaks highlights the need for a rapid and sensitive method for the prediction of viral infectivity in food samples. This study assesses the use of propidium monoazide (PMA) coupled with real-time PCR methods (RT-qPCR or qPCR for RNA or DNA viruses, respectively) in the determination of viral infectivity in complex animal-related food matrices. Clam and Spanish fermented sausage ("chorizo") samples were spiked with infectious and heat-inactivated human adenovirus-2 (HAdV-2) and mengovirus (vMC 0 ). PMA-qPCR/RT-qPCR discriminated infective virus particles, with significant reductions (>2.7 log 10 or 99.7%). Additionally, infectious HAdV-2 and vMC 0 were quantified by plaque assay (in plaque forming units, PFU), and compared with those in virus genomes copies (GCs) quantified by PMA-qPCR/RT-qPCR. A consistent correlation ( R 2 > 0.92) was showed between PFU and GCs along serial 10-fold dilutions in both DNA and RNA virus and in both food matrices. This study shows the use of PMA coupled to qPCR/RT-qPCR as a promising alternative for prediction of viral infectivity in food samples in comparison to more expensive and time-consuming methods and for those viruses that are not able to grow under available cell culture techniques.

Apa Reference Quijada, N. M., Fongaro, G., Barardi, C. R. M., Hernández, M., & Rodríguez-Lázaro, D. (2016). Propidium Monoazide Integrated with qPCR Enables the Detection and Enumeration of Infectious Enteric RNA and DNA Viruses in Clam and Fermented Sausages. Frontiers in Microbiology, 7. 10.3389/fmicb.2016.02008
Doi 10.3389/fmicb.2016.02008
Publication Date 15 Dec 2016
Publication Type Article
Researcher Narciso M. Quijada
Ontology Expression Profiling, Food safety, Viromics
Research Groups
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