Narciso M. Quijada
Biography
|
Bioinformatics, microbiome, antimicrobial resistance |
Profile
| Institution | IBFG |
| Position | Postdoc Momentum (recently gained a tenure group leader -científico titular- position; resolution pending) |
| Home page | https://github.com/nmquijada/ |
| Contact email | nmq@usal.es |
| ORCID | 0000-0002-1956-7205 |
BCB Hub
| BCB Committee | Teaching links with University, Junior Hub, Future Plan |
| BCB Tools | |
| BCB Services | Bioinformatics Unit at IBFG |
Research
Research topics
Bioinformatics Software and ToolsMetagenomics
Research lines
None
Publications 47 entries
- Biofilm capacity of the psychrophilic bacteria triggers their persistence in the equipment and their spread to beef products throughout processing Article · May 2026
- Stage-specific Recombination Factors Differentially Regulate Double-strand Break Repair Fidelity and Influence Genome Stability Preprint · 25 Mar 2026
- Cold storage, hot spots: Household refrigerators as under-recognized hubs of microbial diversity Article · Mar 2026
- Dynamics of the milk microbial community during subacute ruminal acidosis with or without intramammary lipopolysaccharide challenge in dairy cows Article · 26 Feb 2026
- Transcriptomic and biochemical analyses reveal wheat drought mitigation by Trichoderma simmonsii and reduced demand for canonical plant stress responses Article · 17 Nov 2025
View all (42 more)
- FungAMR: a comprehensive database for investigating fungal mutations associated with antimicrobial resistance Article · 11 Aug 2025
- The food-associated resistome is shaped by processing and production environments Article · 30 Jul 2025
- Breastfeeding and early Bifidobacterium-driven microbial colonization shape the infant gut resistome Article · 2 Jul 2025
- Microbial succession and interaction in vacuum-packed beef: a longitudinal study of bacterial and fungal dynamics Article · 18 Jun 2025
- The type of food influences the behaviour of Listeria monocytogenes in a food-gastrointestinal-infection model Article · 19 May 2025
- Listeria monocytogenes colonises established multispecies biofilms and resides within them without altering biofilm composition or gene expression Article · Mar 2025
- Microbiome testing in Europe: navigating analytical, ethical and regulatory challenges Article · 18 Dec 2024
- FungAMR: A comprehensive portrait of antimicrobial resistance mutations in fungi Preprint · 7 Oct 2024
- Unexplored microbial diversity from 2,500 food metagenomes and links with the human microbiome Article · Oct 2024
- Microbiome mapping in dairy industry reveals new species and genes for probiotic and bioprotective activities Article · 2 Aug 2024
- Microbial community structure of plant-based meat alternatives Article · 13 May 2024
- Identification of Tomato microRNAs in Late Response to Trichoderma atroviride Article · 28 Jan 2024
- Improved sampling and DNA extraction procedures for microbiome analysis in food-processing environments Article · 24 Jan 2024
- Correction to: Capture and transport of white rhinoceroses ( Ceratotherium simum ) cause shifts in their fecal microbiota composition towards dysbiosis Article · 1 Jan 2024
- Draft Genome Sequences of Bacillus licheniformis and Bacillus paralicheniformis Strains Isolated from Irish Skim Milk Powder Article · 18 Jul 2023
- Plant-oriented microbiome inoculum modulates age-related maturation of gut-mucosal expression of innate immune and barrier function genes in suckling and weaned piglets Article · 1 Jan 2023
- Capture and transport of white rhinoceroses (Ceratotherium simum) cause shifts in their fecal microbiota composition towards dysbiosis Article · 1 Jan 2023
- Exposure to plant-oriented microbiome altered jejunal and colonic innate immune response and barrier function more strongly in suckling than in weaned piglets Article · 27 Sep 2022
- The Core Human Microbiome: Does It Exist and How Can We Find It? A Critical Review of the Concept Article · 13 Jul 2022
- Microbiome Research as an Effective Driver of Success Stories in Agrifood Systems – A Selection of Case Studies Article · 4 Jul 2022
- Boron nutrition affects growth, adaptation to stressful environments, and exopolysaccharide synthesis of Ensifer meliloti Article · Jun 2022
- Metatranscriptomic Analyses Unravel Dynamic Changes in the Microbial and Metabolic Transcriptional Profiles in Artisanal Austrian Hard-Cheeses During Ripening Article · 1 Mar 2022
- Co-Occurrence of Listeria spp. and Spoilage Associated Microbiota During Meat Processing Due to Cross-Contamination Events Article · 5 Feb 2021
- Austrian Raw-Milk Hard-Cheese Ripening Involves Successional Dynamics of Non-Inoculated Bacteria and Fungi Article · 11 Dec 2020
- Virulence characterization and comparative genomics of Listeria monocytogenes sequence type 155 strains Article · 30 Nov 2020
- Co-infection of Chicken Layers With Histomonas meleagridis and Avian Pathogenic Escherichia coli Is Associated With Dysbiosis, Cecal Colonization and Translocation of the Bacteria From the Gut Lumen Article · 30 Oct 2020
- Dietary Supplementation with Sugar Beet Fructooligosaccharides and Garlic Residues Promotes Growth of Beneficial Bacteria and Increases Weight Gain in Neonatal Lambs Article · 13 Aug 2020
- Bioinformatics of next generation sequencing in clinical microbiology diagnosis Article · Apr 2020
- High-throughput sequencing and food microbiology Book / chapter · 2020
- Oxacillin-susceptible mecA-positive Staphylococcus aureus associated with processed food in Europe Article · Sep 2019
- Microbiota of newborn calves and their mothers reveals possible transfer routes for newborn calves’ gastrointestinal microbiota Article · 1 Aug 2019
- TORMES: an automated pipeline for whole bacterial genome analysis Article · 8 Apr 2019
- Fecal Microbiota of Toxigenic Clostridioides difficile-Associated Diarrhea Article · 14 Jan 2019
- Different Lactobacillus populations dominate in “Chorizo de León” manufacturing performed in different production plants Article · Apr 2018
- Infrequent isolation of extensively drug-resistant (XDR) Klebsiella pneumoniae resistant to colistin in Spain Article · Mar 2018
- Autochthonous facility-specific microbiota dominates washed-rind Austrian hard cheese surfaces and its production environment Article · Feb 2018
- Daily thanatomicrobiome changes in soil as an approach of postmortem interval estimation: An ecological perspective Article · Sep 2017
- Co-occurrence of colistin-resistance genes mcr-1 and mcr-3 among multidrug-resistant Escherichia coli isolated from cattle, Spain, September 2015 Article · 3 Aug 2017
- Escherichia coli ST167 carrying plasmid mobilisable mcr-1 and blaCTX-M-15 resistance determinants isolated from a human respiratory infection Article · Aug 2017
- Dynamics of the oral microbiota as a tool to estimate time since death Article · Aug 2017
- Propidium monoazide integrated with qPCR enables the detection and enumeration of infectious enteric RNA and DNA viruses in clam and fermented sausages Article · 15 Dec 2016
- Identifying beneficial qualities of Trichoderma parareesei for plants Article · 15 Mar 2014