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Detalle de: Harmonization of quality metrics and power calculation in multi-omic studies

Title Harmonization of quality metrics and power calculation in multi-omic studies
Abstract

Multi-omic studies combine measurements at different molecular levels to build comprehensive models of cellular systems. The success of a multi-omic data analysis strategy depends largely on the adoption of adequate experimental designs, and on the quality of the measurements provided by the different omic platforms. However, the field lacks a comparative description of performance parameters across omic technologies and a formulation for experimental design in multi-omic data scenarios. Here, we propose a set of harmonized Figures of Merit (FoM) as quality descriptors applicable to different omic data types. Employing this information, we formulate the MultiPower method to estimate and assess the optimal sample size in a multi-omics experiment. MultiPower supports different experimental settings, data types and sample sizes, and includes graphical for experimental design decision-making. MultiPower is complemented with MultiML, an algorithm to estimate sample size for machine learning classification problems based on multi-omic data.

Apa Reference Tarazona, S., Balzano-Nogueira, L., Gómez-Cabrero, D., Schmidt, A., Imhof, A., Hankemeier, T., Tegnér, J., Westerhuis, J. A., & Conesa, A. (2020). Harmonization of quality metrics and power calculation in multi-omic studies. Nature Communications, 11(1). 10.1038/s41467-020-16937-8
Doi 10.1038/s41467-020-16937-8
Publication Date 18 Jun 2020
Publication Type Article
Researcher Ana Conesa
Ontology Omics, Data Analysis, Experimental design
Research Groups Genomics of Gene Expression
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