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Detalle de: WeReview: CRISPR Tools—Live Repository of Computational Tools for Assisting CRISPR/Cas Experiments

Title WeReview: CRISPR Tools—Live Repository of Computational Tools for Assisting CRISPR/Cas Experiments
Abstract

Computational tools are essential in the process of designing a CRISPR/Cas experiment for the targeted modification of an organism’s genome. Among other functionalities, these tools facilitate the design of a guide-RNA (gRNA) for a given nuclease that maximizes its binding to the intended genomic site, while avoiding binding to undesired sites with similar sequences in the genome of the organism of interest (off-targets). Due to the popularity of this methodology and the rapid pace at which it evolves and changes, new computational tools show up constantly. This rapid turnover, together with the intrinsic high death-rate of bioinformatics tools, mean that many of the published tools become unavailable at some point. Consequently, the traditional ways to inform the community about the landscape of available tools, i.e., reviews in the scientific literature, are not adequate for this fast-moving field. To overcome these limitations, we have developed “WeReview: CRISPR Tools,” a live, on-line, user-updatable repository of computational tools to assist researchers in designing CRISPR/Cas experiments. In its web site users can find an updated comprehensive list of tools and search for those fulfilling their specific needs, as well as proposing modifications to the data associated with the tools or the incorporation of new ones.

Apa Reference Torres-Perez, R., Garcia-Martin, J. A., Montoliu, L., Oliveros, J. C., & Pazos, F. (2019). WeReview: CRISPR Tools—Live Repository of Computational Tools for Assisting CRISPR/Cas Experiments. Bioengineering, 6(3), 63. 10.3390/bioengineering6030063
Doi 10.3390/bioengineering6030063
Publication Date 25 Jul 2019
Publication Type Software
Researcher Rafael Torres Pérez
Ontology Bioinformatics Software and Tools, Genomics
Research Groups
Tools WeReview: CRISPR Tools

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