This site is under development. For the current active site, go to bcbhub.csic.es.

Orcid Publication

Detalle de: Extreme differences between human germline and tumor mutation densities are driven by ancestral human-specific deviations

Title Extreme differences between human germline and tumor mutation densities are driven by ancestral human-specific deviations
Abstract

Mutations do not accumulate uniformly across the genome. Human germline and tumor mutation density correlate poorly, and each is associated with different genomic features. Here, we use non-human great ape (NHGA) germlines to determine human germline- and tumor-specific deviations from an ancestral-like great ape genome-wide mutational landscape. Strikingly, we find that the distribution of mutation densities in tumors presents a stronger correlation with NHGA than with human germlines. This effect is driven by human-specific differences in the distribution of mutations at non-CpG sites. We propose that ancestral human demographic events, together with the human-specific mutation slowdown, disrupted the human genome-wide distribution of mutation densities. Tumors partially recover this distribution by accumulating preneoplastic-like somatic mutations. Our results highlight the potential utility of using NHGA population data, rather than human controls, to establish the expected mutational background of healthy somatic cells.

Apa Reference Heredia-Genestar, J.M., Marquès-Bonet, T., Juan, D. & Navarro, A. (2020). Extreme differences between human germline and tumor mutation densities are driven by ancestral human-specific deviations. Nature Communications, 11(1). 10.1038/s41467-020-16296-4
Doi 10.1038/s41467-020-16296-4
Publication Date 19 May 2020
Publication Type Article
Researcher David Juan Sopeña
Ontology Genomics, Population dynamics
Research Groups
Tools

Suggest changes

Publications are synced automatically from ORCID, so they can't be edited here directly. Spotted something wrong? Let us know below and we'll take care of it.

← Return to Home