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Detalle de: The planktonic protist interactome: where do we stand after a century of research?

Title The planktonic protist interactome: where do we stand after a century of research?
Abstract

Microbial interactions are crucial for Earth ecosystem function, but our knowledge about them is limited and has so far mainly existed as scattered records. Here, we have surveyed the literature involving planktonic protist interactions and gathered the information in a manually curated Protist Interaction DAtabase (PIDA). In total, we have registered ~2500 ecological interactions from ~500 publications, spanning the last 150 years. All major protistan lineages were involved in interactions as hosts, symbionts (mutualists and commensalists), parasites, predators, and/or prey. Predation was the most common interaction (39% of all records), followed by symbiosis (29%), parasitism (18%), and ‘unresolved interactions’ (14%, where it is uncertain whether the interaction is beneficial or antagonistic). Using bipartite networks, we found that protist predators seem to be ‘multivorous’ while parasite–host and symbiont–host interactions appear to have moderate degrees of specialization. The SAR supergroup (i.e., Stramenopiles, Alveolata, and Rhizaria) heavily dominated PIDA, and comparisons against a global-ocean molecular survey (TARA Oceans) indicated that several SAR lineages, which are abundant and diverse in the marine realm, were underrepresented among the recorded interactions. Despite historical biases, our work not only unveils large-scale eco-evolutionary trends in the protist interactome, but it also constitutes an expandable resource to investigate protist interactions and to test hypotheses deriving from omics tools.

Apa Reference Bjorbækmo, M.F.M., Evenstad, A., Røsæg, L.L., Krabberød, A.K. & Logares, R. (2019). The planktonic protist interactome: where do we stand after a century of research?. The ISME Journal, 14(2), 544-559. 10.1038/s41396-019-0542-5
Doi 10.1038/s41396-019-0542-5
Publication Date 4 Nov 2019
Publication Type Article
Researcher Ramiro Ernesto Logares
Ontology Omics, Biological Databases, Protein-Protein Interactions, Marine Systems
Research Groups
Tools

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