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Detalle de: ERGA-BGE reference genome of Holothuria (Platyperona) sanctori: a sea cucumber from the Mediterranean Sea

Title ERGA-BGE reference genome of Holothuria (Platyperona) sanctori: a sea cucumber from the Mediterranean Sea
Abstract

Holothuria sanctori is a common species of sea cucumber found in the Mediterranean Sea and the Northeast Atlantic Ocean. It typically inhabits shallow rocky and sandy seabeds, where it plays a key ecological role as a sediment engineer processing organic matter ts and thereby contributing to nutrient cycling. As an edible species, H. sanctori is harvested in several countries. Although it is currently listed as a species of "Least Concern" on the IUCN Red List, the absence of a regulatory framework to prevent overexploitation poses a risk of population decline. Given its ecological significance and economic value , H. sanctori has become a focal point in both marine conservation and aquaculture research. The entirety of the genome sequence was assembled into 23 contiguous chromosomal pseudomolecules. This chromosome-level assembly encompasses 1.2 Gb, composed of 135 contigs and 46 scaffolds, with contig and scaffold N50 values of 19.9 Mb and 50.7 Mb, respectively.

Apa Reference Vasileiadou, K., Dailianis, T., Skouradakis, G., Vernadou, E., Karakasi, D., Böhne, A., Monteiro, R., Fernández, R., Escudero, N., Manousaki, T., Moussy, A., Cruaud, C., Labadie, K., Demirdjian, L., Ndar, A., Wincker, P., H Oliveira, P., Aury, J. & Bortoluzzi, C. (2026). ERGA-BGE reference genome of Holothuria (Platyperona) sanctori: a sea cucumber from the Mediterranean Sea. Open Research Europe, 5, 297. 10.12688/openreseurope.20841.3
Doi 10.12688/openreseurope.20841.3
Publication Date 3 Feb 2026
Publication Type Article
Researcher Rosa Fernandez García
Ontology Genome Sequencing, Genome Assembly, Population dynamics, Marine Systems, Animal health
Research Groups
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