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Detalle de: Reference genome of the ant Lasius platythorax

Title Reference genome of the ant Lasius platythorax
Abstract

Ants are a highly diversified insect family of the order Hymenoptera, with many fascinating characteristics such as eusociality, chemical communication, farming, or social parasitism. Moreover, ants frequent a wide variety of habitats from dry deserts, grasslands, and savannas to cold temperate forests. The ability of ants to inhabit such diverse habitat ranges demonstrates their adaptability and ecological resilience. However, little is known about the genetic underpinnings of this vast array of traits and their adaptive potential. Here, we generated a high-quality genome assembly for the ant species Lasius platythorax using long-read PacBio HiFi in combination with chromatin conformation capture (Hi-C) sequencing. We successfully assembled the genome into 15 chromosome-level scaffolds ranging from 7.9 to 19.2 Mb and encompassing 204.6 Mb out of 235.3 Mb (total assembly), and a BUSCO score of 86% (Hymenoptera_odb10). Comparative genomics between the two sister species will provide insights into the genomic basis of trait differentiation.

Apa Reference Feldmeyer, B., Guiglielmoni, N., Kirangwa, J., Menzel, F., Salces-Ortiz, J., Fernández, R., Buena Atienza, E., Ciofi, C., Diroma, M.A., Iannucci, A., Natali, C., Mc Cartney, A.M., Riess, O., Casadei, N. & Waldvogel, A. (2023). Reference genome of the ant Lasius platythorax. 10.1101/2023.07.18.549505
Doi 10.1101/2023.07.18.549505
Publication Date 19 Jul 2023
Publication Type Preprint
Researcher Rosa Fernandez García
Ontology Genomics, Genome Assembly, 3D chromatin structure, Comparative Genomics, Invertebrates, Long-read sequencing
Research Groups
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