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Detalle de: Genome-informed integrative taxonomic description of three cryptic species in the earthworm genus Carpetania (Oligochaeta, Hormogastridae)

Title Genome-informed integrative taxonomic description of three cryptic species in the earthworm genus Carpetania (Oligochaeta, Hormogastridae)
Abstract

Research on cryptic species complexes has reached a consensus on the necessity of integrating multiple sources of evidence. Low-coverage genomic scan techniques like Genotyping-by-Sequencing (GBS) have proven useful to study these groups. Both integrative taxonomy and genome-wide single nucleotide polymorphism (SNP) data remain to be widely applied to earthworms, an animal group with widespread presence of cryptic diversity. The genus Carpetania (formerly the Hormogaster elisae species complex) was found to contain six deeply divergent genetic lineages and some inconspicuous morphological differentiation based in a handful of Sanger-sequenced markers. Marchán et al. (submitted) delimited three well supported species-level clades on the basis of a genomewide SNP dataset and geometric morphometric analyses, highlighting the necessity of a formal taxonomic description of these taxa. In this work, further analyses are applied to the SNP data and a thorough morphological study is performed in order to provide an integrative description of two new species and to redescribe Carpetania elisae . Species-specific SNPs are identified and used as diagnostic characters, and genome-wide and cytochrome oxidase C subunit 1 (COI) genetic distances are compared finding a strong correlation between them. The taxonomic description of these three cryptic species provides a useful tool to include them effectively in ecological studies and biodiversity conservation actions.

Apa Reference Marchán, D.F., Fernández, R., Domínguez, J., Díaz Cosín, D.J. & Novo, M. (2019). Genome-informed integrative taxonomic description of three cryptic species in the earthworm genus Carpetania (Oligochaeta, Hormogastridae). 10.1101/802017
Doi 10.1101/802017
Publication Date 13 Oct 2019
Publication Type Preprint
Researcher Rosa Fernandez García
Ontology Genomics, Population genomics, Phylogenetic Analysis
Research Groups
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