Ramón Peiró Pastor
Animal Breeding and Genetics · INIA
Biography
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Bioinformatician (gene expression, statistical analysis). Bioinformatician and data scientist at the Centro de Biología Molecular Severo Ochoa (CBM, 2011-2020), working on the bioinformatic analysis of Next Generation Sequencing data. Before moving into bioinformatics, he worked as an engineering geologist in geotechnical and engineering geology consulting (TAGSA, 1991-2005; Geocivil 98, 2005-2011). Note: at the INIA-CSIC from August 2020; he is no longer there. (Description curated from publicly available data.) |
Profile
| Institution | INIA |
| Position | Bioinformatician |
| Home page | https://www.linkedin.com/in/ram%C3%B3n-peir%C3%B3-pastor-b1a64b45/ |
| Contact email | ramon.peiro@inia.csic.es |
| ORCID | 0000-0003-2450-2999 |
BCB Hub
| BCB Committee | Expertise mapping |
| BCB Tools | ARAMIS (Accurate long-Reads Assembly correction Method for Indel errorS) |
| BCB Services |
Research
Research topics
OmicsComputational MethodsResourcesTranscriptomicsRNA Sequencing (RNA-seq)Data AnalysisArtificial IntelligenceMachine Learning in BiologyBioinformatics Software and ToolsAnalysis packages (R, Python, etc.)Applications of Computational BiologyBioinformatics enabling techniques
View all (15 more)
GenomicsFunctional genomicsExpression ProfilingComputational TechniquesHigh-performance ComputingEpigenomicsDNA methylationStatistical Methods for BiologyBioinformatics educationSequence analysisFood safetyMicrobial communitiesDeep Learning in BiologyAnimal genomicsMarine Systems
Publications 25 entries
- Transcriptome analysis indicates improved adipose tissue function in growing Iberian pig fed olive by-products based diets Article · 16 May 2025
- Expression and structural analysis of taste receptor genes in Iberian and Duroc pigs Article · 2 May 2025
- Oxford nanopore sequencing as an alternative to reduced representation bisulphite sequencing for the identification of CpGs of interest in livestock populations Article · Jan 2024
- Evaluating the potential of (epi)genotype-by-low pass nanopore sequencing in dairy cattle: a study on direct genomic value and methylation analysis Article · 12 Jul 2023
- Impact of oestrus synchronization devices on ewes vaginal microbiota and artificial insemination outcome Article · 23 Mar 2023
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- Population structure and genetic variability in wild and farmed Mediterranean populations of gilthead seabream and European seabass inferred from a 60K combined species SNP array Article · Jun 2022
- ARAMIS: From systematic errors of NGS long reads to accurate assemblies Software · 19 May 2021
- Sequencing of SARS-CoV-2 genome using different nanopore chemistries Article · Apr 2021
- Genomics Data Treatment in the Era of Next Generation Sequencing Book / chapter · 2021
- Liquid biopsy by NGS: Differential presence of exons (DPE) is related to metastatic potential in a colon-cancer model in the rat Article · Nov 2020
- Thermophiles and Thermozymes Book / chapter · 23 Apr 2019
- Complete assembly of the Leishmania donovani (HU3 strain) genome and transcriptome annotation Article · 16 Apr 2019
- Differences in firing efficiency, chromatin, and transcription underlie the developmental plasticity of the Arabidopsis DNA replication origins Software · 7 Mar 2019
- Into the Thermus Mobilome: Presence, Diversity and Recent Activities of Insertion Sequences Across Thermus spp. Article · 21 Jan 2019
- Complete and de novo assembly of the Leishmania braziliensis (M2904) genome Article · 2019
- Liquid biopsy by NGS : differential presence of exons ( DPE ) in cell‐free DNA reveals different patterns in metastatic and nonmetastatic colorectal cancer Article · 23 Mar 2018
- Resequencing of the Leishmania infantum (strain JPCM5) genome and de novo assembly into 36 contigs Article · 22 Dec 2017
- Human genomics projects and precision medicine Article · 14 Aug 2017
- Retrotransposons are specified as DNA replication origins in the gene-poor regions of Arabidopsis heterochromatin Article · 10 Jun 2017
- Variation of 45S rDNA intergenic spacers in Arabidopsis thaliana Article · 16 Aug 2016
- Basolateral sorting and transcytosis define the Cu+-regulated translocation of ATP7B to the bile canaliculus Article · 1 Jun 2016
- Histone H3 Dynamics Reveal Domains with Distinct Proliferation Potential in the Arabidopsis Root Article · 20 May 2016
- Ecological connectivity shapes quasispecies structure of RNA viruses in an Antarctic lake Article · 11 Aug 2015
- The Functional Topography of the Arabidopsis Genome Is Organized in a Reduced Number of Linear Motifs of Chromatin States Software · 1 Jun 2014
- Mobility of the Native Bacillus subtilis Conjugative Plasmid pLS20 Is Regulated by Intercellular Signaling Article · 31 Oct 2013