reanalyzerGSE
Transcriptomic pipeline to automatically analyze entries from online databases or local raw data
Basic Information
| Repository | https://github.com/BioinfoIPBLN/reanalyzerGSE |
| Documentation | https://github.com/BioinfoIPBLN/reanalyzerGSE |
| Seminar | José Luis Ruiz presents the tool reAnalyzerGSE |
| Main publication (DOI) | 10.1101/2023.07.12.548663 |
| Contact email | joseluis.ruiz@csic.es |
| Authors/Maintainers | Eduardo Andrés-León, José Luis Ruiz Rodríguez |
| Type of application | R/python package |
| Programming languages | RBASH / Shell |
| Keywords | Omics, Transcriptomics, RNA Sequencing (RNA-seq), Expression Profiling |
Technical details
| Input file formats | |
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| Software compatibility | Linux |
| Hardware requirements | |
| Type of containerization | Conda |
| Wrapper type | None |
| Compatible tools | |
| Funding resource | National competitive funding |
| Funding support | National competitive funding |
Statistics
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| Citations (last 12 months) | <100 (~1 as of 15/10/2026) |
| Citations (since first release) | <100 (5 as of 15/10/2026) |
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