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Tool

Golden Standard

Golden Standard (GS) is a Type IIS assembly method underpinned by the Standard European Vector Architecture. GS unlocks modular cloning applications for most bacteria, and delivers combinatorial multi-part assembly to create genetic circuits of up to twenty transcription units (TUs). Reliance on MoClo syntax renders GS fully compatible with many existing tools and it sets the path towards efficient reusability of available part libraries and assembled TUs.

GS provides a computational pipeline for parts characterization and a dedicated web-portal including a repository of parts, vectors, and Wizard and Setup tools that guide users in designing constructs.

Basic Information

Repository http://sysbiol.cnb.csic.es/GoldenStandard/home.php
Documentation
Main publication (DOI) 10.1093/nar/gkad758 view
Contact email jnogales@cnb.csic.es
Authors/Maintainers Juan Nogales
Type of application Web-service
Programming languages
Keywords Computational Methods, Applications of Computational Biology, Model organisms, Systems Biology, Pathway analysis, Non-model organisms, Microbial communities

Technical details

Input file formats
Output file formats
Software compatibility Linux, Mac, Windows
Hardware requirements
Type of containerization None
Wrapper type
Compatible tools MoClo, GoldenBraid, CIDAR, Mobius assembly, Midas, CyanoGate, uLoop, JUMP, The Marburg Collection, SEVA (Standard European Vector Architecture)
Funding resource
Funding support
Statistics
Unique users (last 12 months)
Unique users (since first release)
Software downloads (last 12 months)
Software downloads (since first release)
Jobs submitted (last 12 months)
Jobs submitted (since first release)
Repository clones (last 12 months)
Repository clones (since first release)
Citations (last 12 months) <100 (~14 as of 15/10/2026)
Citations (since first release) <100 (60 as of 15/10/2026)
Early-stage researcher effort (development)
Early-stage researcher effort (maintenance)
Technician-supported effort (development)
Technician-supported effort (maintenance)
Other effort (development)
Other effort (maintenance)
Total effort (development)
Total effort (maintenance)

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