This site is under development. For the current active site, go to bcbhub.csic.es.

Tool

CODfinder

CODfinder.R is a TopDom-based software for identifying Coexpression Domains (CODs) using an expression matrix as input

Basic Information

Repository https://github.com/joseguem/CODfinder
Documentation
Main publication (DOI) 10.1371/journal.pcbi.1005708 view
Contact email jose.reyes@cabimer.es
Authors/Maintainers Jose C. Reyes
Type of application
Programming languages R
Keywords Omics, Transcriptomics, Expression Profiling

Technical details

Input file formats
Output file formats
Software compatibility
Hardware requirements
Type of containerization
Wrapper type
Compatible tools
Funding resource
Funding support
Statistics
Unique users (last 12 months)
Unique users (since first release)
Software downloads (last 12 months)
Software downloads (since first release)
Jobs submitted (last 12 months)
Jobs submitted (since first release)
Repository clones (last 12 months)
Repository clones (since first release)
Citations (last 12 months) <100 (~4 as of 15/10/2026)
Citations (since first release) <100 (63 as of 15/10/2026)
Early-stage researcher effort (development) Jose Antonio Guerrero-Martinez
Early-stage researcher effort (maintenance)
Technician-supported effort (development)
Technician-supported effort (maintenance)
Other effort (development)
Other effort (maintenance)
Total effort (development)
Total effort (maintenance)

Suggest changes

Spotted something outdated or wrong here? Let us know below and we'll take care of it.

← Return to Home