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Tool

MateR

Genomic Mating package. Optimize mating plans using genomic information to maximize genetic gain, within-family variance, and total genetic diversity. Supports polyploids, multi-trait optimization, additive and dominance effects, directional dominance (inbreeding and heterosis), and testers.

Basic Information

Repository https://github.com/TheRocinante-lab/MateR
Documentation https://github.com/TheRocinante-lab/MateR/blob/HEAD/README.md
Main publication (DOI) 10.1093/genetics/iyag013 view
Contact email jisidro@upm.es
Authors/Maintainers Julio Isidro y Sanchez
Type of application R/python package
Programming languages R
Keywords Computational Methods, Applications of Computational Biology, Plant genomics

Technical details

Input file formats
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Statistics
Unique users (last 12 months)
Unique users (since first release)
Software downloads (last 12 months)
Software downloads (since first release)
Jobs submitted (last 12 months)
Jobs submitted (since first release)
Repository clones (last 12 months)
Repository clones (since first release)
Citations (last 12 months) <100 (~3 as of 15/10/2026)
Citations (since first release) <100 (4 as of 15/10/2026)
Early-stage researcher effort (development)
Early-stage researcher effort (maintenance)
Technician-supported effort (development)
Technician-supported effort (maintenance)
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Total effort (maintenance)

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