iFragMent
Assigns chemical compounds to biological pathways (KEGG, EnviPath, Reactome) using a profile-based approach, reporting z-scores and p-values and highlighting the molecular fragments behind each assignment.
Basic Information
| Repository | http://csbg.cnb.csic.es/iFragMent/ |
| Documentation | http://csbg.cnb.csic.es/iFragMent/help.php |
| Main publication (DOI) | 10.1186/s12859-021-04252-y view |
| Contact email | |
| Authors/Maintainers | Florencio Pazos Cabaleiro, Mónica Chagoyen |
| Type of application | Web-service |
| Programming languages | |
| Keywords | Functional annotation, Pathway analysis, Metabolomics |
Technical details
| Input file formats | |
| Output file formats | |
| Software compatibility | Linux, Mac, Windows |
| Hardware requirements | |
| Type of containerization | None |
| Wrapper type | None |
| Compatible tools | |
| Funding resource | |
| Funding support |
Statistics
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| Jobs submitted (last 12 months) | |
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| Repository clones (last 12 months) | |
| Repository clones (since first release) | |
| Citations (last 12 months) | <100 (~1 as of 15/10/2026) |
| Citations (since first release) | <100 (10 as of 15/10/2026) |
| Early-stage researcher effort (development) | |
| Early-stage researcher effort (maintenance) | |
| Technician-supported effort (development) | |
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| Total effort (maintenance) |