Oscar Gonzalez-Recio
Animal Breeding and Genetics · INIA
Biography
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Professor (Personal Chair of Livestock Hologenomics) at The Roslin Institute, The Royal (Dick) School of Veterinary Studies (University of Edinburgh), since June 2025. Previously, Senior Research Scientist at the INIA (2015-2025); Senior Research Scientist at the Victorian Department of Environment and Primary Industries (AgriBio, the Centre for AgriBioscience, Melbourne, Australia, 2013-2015); associate researcher at the INIA (2008-2013); and postdoctoral researcher at the University of Wisconsin-Madison (2007-2008). (Description curated from publicly available data.) Note: at the INIA from 2008 to 2013 and from 2015 to June 2025. |
Profile
| Institution | INIA |
| Position | Full Professor (University of Edinburgh); Senior Research Scientist at INIA-CSIC until June 2025 |
| Home page | https://www.research.ed.ac.uk/en/persons/b58d7a72-2b3b-44e2-b881-7321cbc48d57 |
| Contact email | gonzalez.oscar@inia.csic.es |
| ORCID | 0000-0002-9106-4063 |
BCB Hub
| BCB Committee | Not a member |
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Publications 109 entries
- Incorporating feed efficiency, methane emissions, and ruminal microbiome into economic selection indices in Spanish Holstein cattle Article · Oct 2026
- Exploring methane phenotypes and their relationship with productive traits in the Spanish Holstein Population Article · Jul 2026
- Invited review: Global census on the development and implementation of direct genetic selection for enteric methane emissions in dairy cattle Article · Jun 2026
- Reliable enteric methane prediction from the cattle (Bos taurus) rumen microbiome Article · 13 Apr 2026
- The association of the rumen virome with methane emissions in dairy cattle Article · 6 Nov 2025
View all (104 more)
- Epigenetic insights into mastitis in Mediterranean Italian River buffalo using nanopore sequencing Article · 24 Sep 2025
- Rumen metagenome as a genomic selection target to reduce enteric methane emissions Article · Aug 2025
- Unveiling the hidden biodiversity of microbial chemoreceptor genes in the rare biosphere Preprint · 24 Jun 2025
- Biases from Oxford Nanopore library preparation kits and their effects on microbiome and genome analysis Article · 19 May 2025
- Comparative analysis of Illumina, PacBio, and nanopore for 16S rRNA gene sequencing of rabbit’s gut microbiota Article · 15 May 2025
- Epidemiological and genetic factors affecting severe epizootic hemorrhagic disease in Spanish Holstein cattle during the Southern Europe outbreak of 2023 Article · Apr 2025
- A Recursive Model Approach to Include Epigenetic Effects in Genetic Evaluations Using Simulated DNA Methylation Effects Article · 27 Jan 2025
- Ruminal microbiome changes across lactation in primiparous Holstein cows with varying methane intensity: Heritability assessment Article · Sep 2024
- Modelling heat stress effects on milk production traits in Tunisian Holsteins using a random regression approach Article · 23 Aug 2024
- The oral microbiome as a proxy for feed intake in dairy cattle Article · Aug 2024
- Stress-induced epigenetic effects driven by maternal lactation in dairy cattle: a comethylation network approach Article · 23 Jul 2024
- Genome-Wide Association Study Reveals Quantitative Trait Loci and Candidate Genes Associated with High Interferon-gamma Production in Holstein Cattle Naturally Infected with Mycobacterium Bovis Article · 3 Jun 2024
- Equivalence of variance components between standard and recursive genetic models using LDL′ transformations Article · 2 May 2024
- Including microbiome information in a multi-trait genomic evaluation: a case study on longitudinal growth performance in beef cattle Article · 15 Mar 2024
- The Resilient Dairy Genome Project—A general overview of methods and objectives related to feed efficiency and methane emissions Article · Mar 2024
- Summary-data based Mendelian randomization identifies gene expression regulatory polymorphisms associated with bovine paratuberculosis by modulation of the nuclear factor Kappa β (NF-κß)-mediated inflammatory response Article · 11 Oct 2023
- Effect of Chitosan on Ruminal Fermentation and Microbial Communities, Methane Emissions, and Productive Performance of Dairy Cattle Article · 8 Sep 2023
- Association between High Interferon-Gamma Production in Avian Tuberculin-Stimulated Blood from Mycobacterium avium subsp. paratuberculosis-Infected Cattle and Candidate Genes Implicated in Necroptosis Article · 15 Jul 2023
- Review: Diving into the cow hologenome to reduce methane emissions and increase sustainability Article · Jun 2023
- Invited review: Recursive models in animal breeding: Interpretation, limitations, and extensions Article · Apr 2023
- Random regression models to estimate genetic parameters for milk yield, fat, and protein contents in Tunisian Holsteins Article · 25 Mar 2023
- Invited review: Novel methods and perspectives for modulating the rumen microbiome through selective breeding as a means to improve complex traits: Implications for methane emissions in cattle Article · Mar 2023
- Accuracy of direct genomic values and methylation profile through genotype-by-LowPass sequencing using Nanopore technology Preprint · 16 Jan 2023
- Rumen eukaryotes are the main phenotypic risk factors for larger methane emissions in dairy cattle. Article · Sep 2022
- O140 Influence of feeding agroindustrial by-products to sheep on ruminal microbiome Article · Aug 2022
- Integrating heterogeneous across-country data for proxy-based random forest prediction of enteric methane in dairy cattle Article · Jun 2022
- A Genome-Wide Association Study for Tolerance to Paratuberculosis Identifies Candidate Genes Involved in DNA Packaging, DNA Damage Repair, Innate Immunity, and Pathogen Persistence Article · 6 Apr 2022
- 100. Microbiome-driven breeding strategies are capable of improving average daily gain at different stages of growth in beef cattle Article · Apr 2022
- Genome-Enabled Prediction Methods Based on Machine Learning Book / chapter · 2022
- Fungal and ciliate protozoa are the main rumen microbes associated with methane emissions in dairy cattle Article · 2022
- Identification of loci associated with pathological outcomes in Holstein cattle infected with Mycobacterium avium subsp. paratuberculosis using whole-genome sequence data Article · 11 Oct 2021
- Characterisation of the rumen resistome in Spanish dairy cattle Article · 22 Sep 2021
- Identification of loci associated with susceptibility to Mycobacterium avium subsp. paratuberculosis infection in Holstein cattle using combinations of diagnostic tests and imputed whole-genome sequence data Article · 27 Aug 2021
- New composite traits for joint improvement of milk and fertility trait in Holstein dairy cow Article · 1 Aug 2021
- Holobiont effect accounts for more methane emission variance than the additive and microbiome effects on dairy cattle Article · Aug 2021
- Host Genetics Underlying Pathological Outcomes to Mycobacterium Avium Subsp. Paratuberculosis Infection is Governed by Distinct Genetic Variants Preprint · 9 Jul 2021
- A dimensional reduction approach to modulate the core ruminal microbiome associated with methane emissions via selective breeding Article · Jul 2021
- Influence of genetic background and dietary oleic acid on gut microbiota composition in Duroc and Iberian pigs Article · 20 May 2021
- Genetic parameters of somatic cell scores using random regression test-day models with Legendre polynomials in Tunisian dairy cattle Article · Nov 2020
- Mitigation of greenhouse gases in dairy cattle via genetic selection: 2. Incorporating methane emissions into the breeding goal Article · Aug 2020
- Mitigation of greenhouse gases in dairy cattle via genetic selection: 1. Genetic parameters of direct methane using noninvasive methods and proxies of methane Article · Aug 2020
- Author Correction: Whole rumen metagenome sequencing allows classifying and predicting feed efficiency and intake levels in cattle Article · 13 Feb 2020
- Improving phenotypic prediction in dairy cattle breeding using the metagenome Book / chapter · 24 Dec 2019
- Long reads from Nanopore sequencing as a tool for animal microbiome studies Preprint · 23 Dec 2019
- Structural equation models to disentangle the biological relationship between microbiota and complex traits: Methane production in dairy cattle as a case of study Article · 15 Oct 2019
- Comparison Between Non-Invasive Methane Measurement Techniques in Cattle Article · 15 Aug 2019
- Changes in the rumen and colon microbiota and effects of live yeast dietary supplementation during the transition from the dry period to lactation of dairy cows Article · Jul 2019
- Corrigendum to “On the value of the phenotypes in the genomic era” (J. Dairy Sci. 97:7905–7915) Article · Jun 2019
- Whole rumen metagenome sequencing allows classifying and predicting feed efficiency and intake levels in cattle Article · 9 Jan 2019
- Comparison of Mothur and QIIME for the Analysis of Rumen Microbiota Composition Based on 16S rRNA Amplicon Sequences Article · 13 Dec 2018
- Expected consequences of including methane footprint into the breeding goals in beef cattle. A Spanish Blonde d'Aquitaine population as a case of study Article · 23 Jul 2018
- Short communication: Signs of host genetic regulation in the microbiome composition in 2 dairy breeds: Holstein and Brown Swiss Article · Mar 2018
- A haplotype regression approach for genetic evaluation using sequences from the 1000 bull genomes Project Article · 30 Dec 2017
- A bio-economic model to improve profitability in a large national beef cattle population Article · 21 Dec 2017
- Nimbus: a Ruby gem to implement Random Forest algorithms in a genomic selection context Article · 18 Aug 2017
- Including nonadditive genetic effects in mating programs to maximize dairy farm profitability Article · Feb 2017
- Signs of host genetic regulation in the microbiome composition in cattle Preprint · 17 Jan 2017
- Associated effects of copy number variants on economically important traits in Spanish Holstein dairy cattle Article · Aug 2016
- Response: Commentary: Past, present and future of epigenetics applied to livestock breeding Article · 7 Jun 2016
- Accounting for dominance to improve genomic evaluations of dairy cows for fertility and milk production traits Article · 1 Feb 2016
- Improving the reliability of female fertility breeding values using type and milk yield traits that predict energy status in Australian Holstein cattle Article · Jan 2016
- Rare Variants in Transcript and Potential Regulatory Regions Explain a Small Percentage of the Missing Heritability of Complex Traits in Cattle Article · 7 Dec 2015
- Hot topic: Definition and implementation of a breeding value for feed efficiency in dairy cows Article · Oct 2015
- Validation of markers with non-additive effects on milk yield and fertility in Holstein and Jersey cows Article · 22 Jul 2015
- On the value of the phenotypes in the genomic era Article · Dec 2014
- Fertility subindex for improving fertility performance in Iranian Holstein cows Article · 16 Oct 2014
- Machine learning methods and predictive ability metrics for genome-wide prediction of complex traits Article · Aug 2014
- Next generation modeling in GWAS: comparing different genetic architectures Article · 17 Jun 2014
- Incorporating heifer feed efficiency in the Australian selection index using genomic selection Article · Jun 2014
- Prediction of liveweight of cows from type traits and its relationship with production and fitness traits Article · May 2014
- Combining Genomic and Genealogical Information in a Reproducing Kernel Hilbert Spaces Regression Model for Genome-Enabled Predictions in Dairy Cattle Article · 26 Mar 2014
- Short communication: Validation of genomic breeding value predictions for feed intake and feed efficiency traits Article · Jan 2014
- Error rate for imputation from the Illumina BovineSNP50 chip to the Illumina BovineHD chip Article · 2014
- Assets of imputation to ultra-high density for productive and functional traits Article · Sep 2013
- Reaction norm of fertility traits adjusted for protein and fat production level across lactations in Holstein cattle Article · Jul 2013
- Selection strategies for fertility traits of Holstein cows in Iran Article · Mar 2013
- The gradient boosting algorithm and random boosting for genome-assisted evaluation in large data sets Article · Jan 2013
- Comparison of methods for the implementation of genome-assisted evaluation of Spanish dairy cattle Article · Jan 2013
- Trans-Generational Effect of Maternal Lactation during Pregnancy: A Holstein Cow Model Article · 20 Dec 2012
- Epigenetics: A New Challenge in the Post-Genomic Era of Livestock Article · 2012
- Genotyping strategies for genomic selection in small dairy cattle populations Article · 2012
- Genetic variance components for female fertility in Iranian Holstein cows Article · Aug 2011
- Review. Promises, pitfalls and challenges of genomic selection in breeding programs Article · 19 May 2011
- Genome-wide prediction of discrete traits using bayesian regressions and machine learning Article · 17 Feb 2011
- Product versus additive model for studying artificial insemination results in several livestock populations Article · 1 Feb 2011
- A comparison between different survival and threshold models with an application to piglet preweaning survival in a dry-cured ham-producing crossbred line1 Article · 1 Jun 2010
- Radial basis function regression methods for predicting quantitative traits using SNP markers Article · Jun 2010
- L 2 -Boosting algorithm applied to high-dimensional problems in genomic selection Article · Jun 2010
- Detecting single-nucleotide polymorphism by single-nucleotide polymorphism interactions in rheumatoid arthritis using a two-step approach with machine learning and a Bayesian threshold least absolute shrinkage and selection operator (LASSO) model Article · Dec 2009
- Predictive ability of direct genomic values for lifetime net merit of Holstein sires using selected subsets of single nucleotide polymorphism markers Article · Oct 2009
- Genome-assisted prediction of a quantitative trait measured in parents and progeny: application to food conversion rate in chickens Article · 5 Jan 2009
- Machine learning in genome‐wide association studies Article · Jan 2009
- Nonparametric Methods for Incorporating Genomic Information Into Genetic Evaluations: An Application to Mortality in Broilers Article · 1 Apr 2008
- Inbreeding Depression on Female Fertility and Calving Ease in Spanish Dairy Cattle Article · Dec 2007
- Impact of Calving Ease on Functional Longevity and Herd Amortization Costs in Basque Holsteins Using Survival Analysis Article · Sep 2007
- Genetic relationship of discrete-time survival with fertility and production in dairy cattle using bivariate models Article · 6 Jul 2007
- Genetic Analysis of the Twenty-One-Day Pregnancy Rate in US Holsteins Using an Ordinal Censored Threshold Model with Unknown Voluntary Waiting Period Article · Apr 2007
- Selection for Female Fertility Using Censored Fertility Traits and Investigation of the Relationship with Milk Production Article · Nov 2006
- Genetic and Phenotypic Relationships Among Locomotion Type Traits, Profit, Production, Longevity, and Fertility in Spanish Dairy Cows Article · May 2006
- Comparison of models using different censoring scenarios for days open in Spanish Holstein cows Article · Apr 2006
- Number of Inseminations to Conception in Holstein Cows Using Censored Records and Time-Dependent Covariates Article · Oct 2005
- Genetic Parameters for Female Fertility Traits and a Fertility Index in Spanish Dairy Cattle Article · Sep 2005
- Genetic Analysis of an Artificial Insemination Progeny Test Program Article · Feb 2005
- Economic Value of Female Fertility and its Relationship with Profit in Spanish Dairy Cattle Article · Sep 2004