Guillem Salazar
Microbiome Ecology · I2SYSBIO
Biography
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Microbial Ecologist with a strong background in oceanography, bioinformatics, and data analysis. Skilled in the analysis of microbiomes using multi-omics datasets. I am interested in understanding the ecological and evolutionary drivers of prokaryotic diversity in aquatic ecosystems. In order to address these questions, I use diverse sequencing technologies combined with advanced bioinformatics and statistics to tackle such questions at different levels of biological organization, from genes to ecosystems. |
Profile
| Institution | I2SYSBIO |
| Position | Ramon y Cajal |
| Home page | https://www.i2sysbio.es/investigator/2014/ |
| Contact email | guillem.salazar@csic.es |
| ORCID | 0000-0002-9786-1493 |
BCB Hub
| BCB Committee | Not a member |
| BCB Tools | |
| BCB Services |
Research
Research topics
Bioinformatics Software and ToolsMetagenomicsMetatranscriptomics
Research lines
None
Projects, networks, transfer & teaching
Funded projects 2
Publications 56 entries
- Nitrogen fixation rates increase with diazotroph richness in the global ocean Article · 11 Jul 2026
- Coral microbiomes as reservoirs of unknown genomic and biosynthetic diversity Article · 25 Feb 2026
- Oceanography, biogeochemical cycles, and biodiversity in the Central Arctic Ocean: Current state of knowledge and research directions for the Tara Polaris expeditions Article · 2026
- Global currents, microbial footprints Article · Sep 2025
- Host-level biodiversity shapes the dynamics and networks within the coral reef microbiome Article · Jan 2025
View all (51 more)
- Niche availability and competitive loss by facilitation control proliferation of bacterial strains intended for soil microbiome interventions Article · 22 Mar 2024
- Water aging and the quality of organic carbon sources drive niche partitioning of the active bathypelagic prokaryotic microbiome Article · 3 Feb 2024
- Metagenomic and -transcriptomic analyses of microbial nitrogen transformation potential, and gene expression in Swiss lake sediments Article · Jan 2024
- Top abundant deep ocean heterotrophic bacteria can be retrieved by cultivation Article · 2 Sep 2023
- The microbiota conditions a gut milieu that selects for wild-type Salmonella Typhimurium virulence Article · 31 Aug 2023
- Telomere DNA length regulation is influenced by seasonal temperature differences in short-lived but not in long-lived reef-building corals Article · 1 Jun 2023
- Ecology of Endozoicomonadaceae in three coral genera across the Pacific Ocean Article · 1 Jun 2023
- Diversity of the Pacific Ocean coral reef microbiome Article · 1 Jun 2023
- Tara Oceans (2009-2013) rDNA 16S V4V5 ASV table (dada2) Dataset · 19 Jan 2023
- Tara Oceans (2009-2013) rDNA 18S V9 ASV table (dada2) Dataset · 18 Jan 2023
- Summarized contextual data about metabarcoding Tara Oceans samples (2009-2013) Dataset · 20 Oct 2022
- Biosynthetic potential of the global ocean microbiome Article · 22 Jun 2022
- Tara Pacific 16S rRNA data analysis release Dataset · 31 May 2022
- TARA Pacific Bleaching Prevalence of Sampling Sites (Islands) Dataset · 2 May 2022
- Cryptic and abundant marine viruses at the evolutionary origins of Earth’s RNA virome Article · 8 Apr 2022
- TARA Pacific CTAX colony morphological annotations release version 1_1 Dataset · 29 Mar 2022
- TARA Pacific CDIV cnidarian host taxonomic annotation release version 1_1 Dataset · 4 Mar 2022
- Tara Pacific CDIV ITS2 Symbiodiniaceae data release Dataset · 2 Mar 2022
- Compendium of 530 metagenome-assembled bacterial and archaeal genomes from the polar Arctic Ocean Article · 15 Nov 2021
- mTAGs: taxonomic profiling using degenerate consensus reference sequences of ribosomal RNA genes Article · 13 Jul 2021
- Tara Pacific V9 18S rDNA metabarcoding dataset Dataset · 29 Jun 2021
- Microbiome meta-analysis and cross-disease comparison enabled by the SIAMCAT machine learning toolbox Article · 30 Mar 2021
- Supplementary information for Salazar et al. (2021): mTAGs: taxonomic profiling using degenerate consensus reference sequences of ribosomal RNA genes Dataset · 18 Dec 2020
- Tara Pacific 18S-based coral host genetic analysis data release version 1 Dataset · 10 Nov 2020
- Biogeography of marine giant viruses reveals their interplay with eukaryotes and ecological functions Article · 7 Sep 2020
- Diversity and distribution of marine heterotrophic bacteria from a large culture collection Article · 13 Jul 2020
- Major imprint of surface plankton on deep ocean prokaryotic structure and activity Article · May 2020
- Scaling of species distribution explains the vast potential marine prokaryote diversity Article · 10 Dec 2019
- Global Trends in Marine Plankton Diversity across Kingdoms of Life Article · Nov 2019
- Gene Expression Changes and Community Turnover Differentially Shape the Global Ocean Metatranscriptome Article · Nov 2019
- Consistent host and organ occupancy of phyllosphere bacteria in a community of wild herbaceous plant species Article · 17 Oct 2019
- Common photosinthetic enzymes from 174 metagenomes from the Malaspina Expedition 2010 (Ortega et al. 2019) Dataset · 17 Mar 2019
- Microbial abundance, activity and population genomic profiling with mOTUs2 Article · 4 Mar 2019
- Unveiling the role and life strategies of viruses from the surface to the dark ocean Article · Sep 2017
- Exploring Microdiversity in Novel Kordia sp. (Bacteroidetes) with Proteorhodopsin from the Tropical Indian Ocean via Single Amplified Genomes Article · 25 Jul 2017
- Marine microbial diversity Article · Jun 2017
- Cyanobacterial symbionts diverged in the late Cretaceous towards lineage-specific nitrogen fixation factories in single-celled phytoplankton Article · 22 Mar 2016
- Particle‐association lifestyle is a phylogenetically conserved trait in bathypelagic prokaryotes Article · Nov 2015
- Code And Data Associated To Salazar Et Al. (2015) Molecol Dataset · 15 Oct 2015
- Global diversity and biogeography of deep-sea pelagic prokaryotes Article · 7 Aug 2015
- Ubiquitous healthy diatoms in the deep sea confirm deep carbon injection by the biological pump Article · 9 Jul 2015
- Response of rare, common and abundant bacterioplankton to anthropogenic perturbations in a Mediterranean coastal site Article · 1 Jun 2015
- Structure and function of the global ocean microbiome Article · 22 May 2015
- Determinants of community structure in the global plankton interactome Article · 22 May 2015
- Validation of a new catalysed reporter deposition–fluorescence in situ hybridization probe for the accurate quantification of marine B acteroidetes populations Article · 7 Jul 2014
- Marked seasonality of aerobic anoxygenic phototrophic bacteria in the coastal NW M editerranean S ea as revealed by cell abundance, pigment concentration and pyrosequencing of puf M gene Article · 17 Oct 2013
- Biogeography of the uncultured marine picoeukaryote MAST-4: temperature-driven distribution patterns Article · 18 Apr 2013
- Temperature Adaptation Markedly Determines Evolution within the Genus Saccharomyces Article · Apr 2011
- Why are there so many kinds of planktonic consumers? The answer lies in the allometric diet breadth Article · 30 Jun 2010
- Factors controlling the colonial structure of Pediastrum tetras (Chlorophyceae) Article · 14 Sep 2008
- Nitrate uptake rates in freshwater plankton: the effect of food web structure Article · 2008