This site is under development. For the current active site, go to bcbhub.csic.es.

Researcher

Ana Rojas

Computational Biology and Bioinformatics (CBBIO.CABD) · CABD

Biography

Trained as a molecular microbiologist in Madrid and the U.S. (1999), she later specialized in bioinformatics and computational biology, working in several U.S. labs from 1999 to 2003. This includes a NASA-NSCORT fellowship at UCSD in R.F. Doolittle's lab and research in Adam Godzik's lab in La Jolla, CA. Between 2003 and 2006, she continued her work in Spain, holding a Marie Curie fellowship at the CNB-CSIC in the group led by Alfonso Valencia.
In 2006, she joined CNIO as a staff scientist and established her independent group in 2009 at the former IMPPC in Badalona. In 2013, she moved her group to the Institute of Biomedicine of Seville and later to the Andalusian Center for Developmental Biology (CABD) in Seville in 2018.
She has been Track Chair of the ISCB Function COSI since 2024, is a founding member of the Spanish Society of Computational Biology (SEBIBiC) founded in 2020, and serves on the executive committee of CSIC's BCBHub network for computational biologists (2023), among different commissions.
Her current research interests focus on understanding the relationships between sequence, structure, and function, particularly focusing on the multifunctional aspects of proteins relevant to biotechnology (biosensors) and biomedicine (therapeutic drugs) through AI-based techniques. She is also involved with the ENIA Chair at USE-Google Spain for AI.
In the past, she worked as a forensic biologist, bird watcher, and field microbiologist. She has named a bacterial species, Erwinia toletana sp. nov.

Profile

Institution CABD
Position Investigadora Cientifica
Home page http://bioinfocb.es
Contact email a.rojas.m@csic.es
ORCID 0000-0003-0750-9099

Research

Research topics

OmicsComputational MethodsResourcesData AnalysisArtificial IntelligenceMachine Learning in BiologyBioinformatics Software and ToolsAnalysis packages (R, Python, etc.)Applications of Computational BiologyModel organismsBioinformatics enabling techniquesLarge language models
View all (14 more)
Functional genomicsFunction predictionStructural bioinformaticsMolecular evolutionFAIRficationSequence analysisProteomicsStructure-function relationshipStructure predictionDevelopmentNon-model organismsDeep Learning in BiologyStructural genomicsKnowledge graphs

Research lines

Projects, networks, transfer & teaching

Research networks

National

  • CSIC/BCB.Hub
  • CSIC/Life.Hub
  • SAB member IGDR, FR.
  • SAB president, IMIB, ES.

International

  • Desde 2024. ISCB. Track Chair of The Function Community of Interest.

Industry & knowledge transfer

Collaborating companies

  • Miembro investigador. TSI-100930-2023-2. Contrato: Cátedra ENIA Google Spain/Universidad de Sevilla en Inteligencia Artificial. 31-08-2024/31-12-2025. IP: Carmen Barroso.

Patents

  • Blázquez-Gómez, Jesús, Castañeda-García, Alfredo, Prieto-Márquez Ana I., Rojas-Mendoza, Ana M., Wadel, Simon; Cantillon, Daire; Doherty, A. P201531949. “Cepas de Mycobacterium hipermutables”. España y UK, 31/12/2015. SAS/CSIC/USE

Teaching

Master programs

  • MSc in Omics Data Analysis and Systems Biology - Universidad Internacional de Andalucía and Universidad de Sevilla (course "Applications and Discussions in Clinical Medicine", course coordinator; since 2021)
  • MSc in Biomedical Research - Universidad de Sevilla (course "Functional Genomics and Biocomputing", external lecturer; since 2016)
  • Master in Data Science and Big Data (university-specific degree) - Universidad de Sevilla, Faculty of Mathematics (module "Machine Learning II")

Doctoral programs

  • Doctoral Programme in Biotechnology, Engineering and Chemical Technology - Universidad Pablo de Olavide (research line in Engineering, Data Science and Bioinformatics; external lecturer since 2018)

Funded projects 1

Publications 53 entries

View all (48 more)

Suggest changes

Spotted something outdated or wrong here? Let us know below and we'll take care of it.

← Return to Home