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Research Group

Detalle de: Computational and structural biology @EEAD-CSIC

Title Computational and structural biology @EEAD-CSIC
Description

The Computational & Structural Biology Group at EEAD-CSIC lies at the intersection of computational and structural biology, genomics and plant breeding. Our main activities are the development of software and databases for the analysis of genomic and agroclimatic data, as well as structural and evolutionary studies of protein families. We collaborate with research groups from EEAD-CSIC, different universities and CSIC hubs BCB and Life. The group is part of the INB/ELIXIR ES node and represents CSIC at partnership Agriculture of Data.

Home Page https://eead.csic.es/compbio
Contact Email compbio@eead.csic.es
Collaborating Companies
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Patents
Hpc Resources
Institution EEAD
Ontology Omics, Computational Methods, Resources, Transcriptomics, RNA Sequencing (RNA-seq), Data Analysis, Bioinformatics Software and Tools, Analysis packages (R, Python, etc.), Data Visualization, Applications of Computational Biology, Bioinformatics enabling techniques, Genomics, Functional genomics, Structural bioinformatics, Bioinformatics Infrastructure, Biological Databases, Expression Profiling, Computational models and simulations, Gene regulatory networks, Computational Techniques, High-performance Computing, Parallel Computing, Desktop application, Molecular evolution, FAIRfication, Bioinformatics education, Evolutionary modelling, Sequence analysis, Phylogenetic Analysis, Plant genomics, Structure prediction, Non-model organisms, Population dynamics, Cloud Computing, Phylogenomics
Tools RSAT Plants, GET_HOMOLOGUES, footprintDB, 3D-footprint, BARLEYMAP
Service Units Agrigenomics and Climate Data Science (EEAD)
Research Lines Pangenomics and transcriptional regulation of grasses, High-resolution agroclimatic indices for field trials and adaptation studies, Evolutionary and structural analysis of ductile proteins (IDPs) and flavoenzymes
Funded Projects Variables agroclimáticas de alta resolución para ensayos agronómicos y adaptación de cereales MMT24-EEAD-01, Genética y pangenómica de cebadas mediterráneas para su adaptación a estreses abióticos, pre-mejora y mejora PID2022-142116OB-I00, The soil biodiversity and functionality of Mediterranean olive groves: a holistic analysis of the influence of land management on olive oil quality and safety
Selected Publications
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Researchers Bruno Contreras Moreira, Sara Herrera, Rubén Sancho Cohen

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